Sphingobacterium sp. dk4302: GFH32_08890
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Entry
GFH32_08890 CDS
T06292
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sphe
Sphingobacterium sp. dk4302
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphe02000
]
GFH32_08890
Transporters [BR:
sphe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GFH32_08890
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
QGA26436
UniProt:
A0A5Q0QAI2
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Position
2094802..2096613
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AA seq
603 aa
AA seq
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MKKIYVFNLLALLLLGGCSKDVLDRKPLDRISETIVWNDKNAVLAHLAGSYSMMSVLENE
TPEKYVGIRPGVGWTIEGQVGATLITNLTDEATWGMYPNWAVYRNSGITINGGLLEWWEN
SYVIIRQLNEFIEQVPNSSIAEDLKKSLVAEARFLRAYNYFSMVRRYGGVPLITKVQQIS
DPQEELYPKRNTEKELYDFVIKEMNEASLDLPAVNQQGRASKYAALSLLSRAALYAGSIA
EFGQIQLNGLLGIPANEANAYYTKSYEASQKIIQEGVHKLYNGSADKTKNFRDIFLVKGN
PEAIFVVQHNDKDMIGSGGNGWRYDFIQGPLPNAWYNGNQNMVYLSFIASTFENVDGTLP
DLSTSTLTSKLWTIDELWGKLEPRFFASVYTHGTPWQGSTIDWHKSLKVNGQYLSDANGA
YQGTPHIGLQGQKLGAHTSFGVLKYLDENKNNMSADFASSQDWIVFRFAEILLNHAESAF
KLGKTAEALTVVNQLRDRAGVKPRTNITFDLIQKERKVELAFEGSRYWDLRRWRIATNVL
TKRETGLRYTLDFASKKLELQVLEKVDGGPNVAAIFEPHHYYLPITKTRTQQNTNLEENP
NYR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatatatgtatttaatctcttagcccttttattacttggaggttgtagcaag
gatgtactagatcgcaaacctttagatcgtatctcagaaaccattgtatggaatgataaa
aatgctgtgttagcccatttagccggcagttacagtatgatgagtgtattagagaatgaa
acacctgagaaatatgttggtattcgtcctggcgtaggttggacaattgaaggacaggtt
ggagcaaccctaattactaatttgacggatgaagccacctggggaatgtatcctaactgg
gcagtttatagaaatagtggaattacaattaatggaggtctattagaatggtgggagaac
tcctatgttattatccgtcagttgaacgaatttattgaacaagttcccaattcatcgatt
gccgaagacctaaagaaaagtctagtagcggaagctcgttttctgcgggcctataattat
ttctcgatggttcgacgctatggtggagtgccgttgattactaaagttcaacaaatctcc
gacccacaagaagagctttatccgaaaagaaatacagagaaagaactctacgatttcgtt
attaaagaaatgaatgaggcatcgttagatttaccagccgttaaccagcagggtagagct
tctaaatatgcagcattgagtttattaagtagagcggctctatatgcgggtagtattgct
gaatttgggcaaatacaattgaatggcttattgggaattccagcaaacgaagctaatgca
tattatacaaaaagttatgaagcatctcaaaagattatccaagaaggcgttcataaatta
tacaatggcagtgcagacaagaccaagaactttagagatatattcctcgttaaaggtaat
ccagaggctatttttgttgtacaacataacgataaggatatgattggttctggtggtaat
ggatggcgttacgacttcatacagggaccattgccaaatgcatggtataacggcaatcaa
aatatggtctacctctcttttattgcctctacatttgaaaacgtcgatgggacgcttcca
gatctttcaacgagtactttaaccagtaagctttggactatcgacgagttatggggaaaa
ttggaacctcgattcttcgcttcagtgtatacgcacggtactccatggcaaggttcaaca
atcgactggcataaatcattaaaggtaaatgggcaatatctttccgacgctaatggagct
tatcagggcaccccgcatattggattgcaagggcaaaaactaggcgcgcatacgagtttc
ggcgtgttgaaatacctcgatgaaaacaagaataacatgtccgcagattttgcatcaagt
caagattggatagtcttccgtttcgcagaaatcttgttaaaccacgcggaatcggctttc
aaattagggaaaactgctgaagcactgaccgtagtgaatcaattacgggacagagcaggg
gtaaaaccgagaacaaatattacattcgatttgattcaaaaagaaagaaaagtagagctc
gcttttgaaggttctcgttattgggacttgagaagatggcgtattgcgacaaatgtactt
actaaacgggaaactggattgcgatatacgttagacttcgccagtaaaaagctggaatta
caagtcttagaaaaggtagacggtgggccgaatgttgctgctatttttgaaccgcatcat
tattatctgccaattacaaagacaagaacgcaacagaataccaatttggaagaaaaccct
aattacaggtaa
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