Sphingobacterium zhuxiongii: GFH32_09865
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Entry
GFH32_09865 CDS
T06292
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sphe
Sphingobacterium zhuxiongii
Pathway
sphe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFH32_09865 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphe03019
]
GFH32_09865 (recQ)
03400 DNA repair and recombination proteins [BR:
sphe03400
]
GFH32_09865 (recQ)
Enzymes [BR:
sphe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFH32_09865 (recQ)
Messenger RNA biogenesis [BR:
sphe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GFH32_09865 (recQ)
DNA repair and recombination proteins [BR:
sphe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GFH32_09865 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
QGA26611
UniProt:
A0A5Q0QCL0
LinkDB
All DBs
Position
complement(2322409..2324598)
Genome browser
AA seq
729 aa
AA seq
DB search
MEIEKSLFDNLQDFFGFDNFKGDQEAIITNVLNRKDTFVIMPTGGGKSICYQLPALMSEG
TAIVISPLIALMKNQVDQLRAFGGRDSIAHFLNSSLTKNEILRVKQDVTEGKTKLLYVAP
ESLAKEDNLAFLKSITVSFVAVDEAHCISEWGHDFRPEYRKIRQVINEVGDNIPIIALTA
TATPKVQSDIRKNLQMTDAQLFKSSFNRTNLYYEVRPKQDVIKEIVRFIKSNAGKAGIVY
CLSRKKVEEIAEVLTINGIKALPYHAGLDAKTRAETQDKFLMEDCEVIVATIAFGMGIDK
PDVRYVIHHDIPKSMEGYYQETGRAGRDGGDGFCLAFYSEKDVEKLTKFMKDKPVSEKEI
GTQILKEVIDYSESAVCRRKQILHYFGEKFDETGCNSMCDNCRSAKTYFDAEASLLQVLG
FIKEQGDKFDDQHIINVMIGQNNQPISSYKHDSHPLYGSGKELGVNYWNSLIRQAELSDF
IKKDIDHYGLLQLTEGGKKYINNPYPIKYIINRPMEKASSDGSEDTLGQSSTLDAELLKM
LKDLRKKIAKQKSLPPFVIFQDPSLEEMCTHYPVSTEELKKIQGVGSGKAMKFGAPFVEL
IKKYVEDNDIDRPQDLIIKSTANKSALKVSIIQNIDRKISLEDIASSKGISYEDMLKEVE
SIVNSGTKLNIGYFVDEMIDPDRQDEVYDYFKSAENDSIDGALNELGEEDYSFEDIQLMR
IKFISELGN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaaaaatcactatttgacaatttacaggattttttcgggtttgataatttc
aaaggagatcaggaagcgattatcacgaatgtgcttaatcggaaagatacctttgtaatt
atgccaacgggtggtggcaagtctatctgctatcagctcccggcattgatgagtgaagga
acggctatcgttatctcaccattgattgcacttatgaaaaaccaagtagatcagctgaga
gccttcggtggaagagacagcattgcgcactttttgaattcctcattaaccaagaatgag
attcttcgtgtgaagcaggacgtaacggagggtaaaaccaagttgctctatgtggcaccg
gaatctttggcaaaagaggacaatctcgcgtttttaaagagcattacggtatcgtttgtt
gctgttgatgaggctcactgtatttcagaatgggggcatgacttccgtccggaataccgt
aagatacgtcaagtgattaatgaggttggcgataatatccccatcatcgctttaaccgct
acggctactcccaaagtacagtctgatattcggaagaacttgcagatgactgatgcacaa
ttattcaaatcatcattcaatcgtactaacctctattatgaggtgcgtccgaagcaggat
gtgattaaggagattgtgcgtttcatcaagagtaatgcaggtaaggccggtattgtatac
tgtttaagccgtaagaaagtcgaggagatagcggaggttttgaccatcaatggtatcaag
gcgcttccttatcatgctggcttagatgcgaaaactcgtgcggagactcaagataaattc
ttaatggaagattgcgaagtcattgtggcgactattgctttcgggatgggtattgacaag
cctgatgtgcgctatgtcattcaccatgatattccgaagtcaatggaaggttactaccag
gaaactggacgtgcaggtcgcgatggaggagatggcttttgtttggcattctactcagag
aaggacgttgagaagcttactaaatttatgaaagataagcctgtttcggagaaagaaata
ggtacgcaaatcttaaaggaagtaatcgattactctgaatctgctgtttgtcgcagaaaa
caaattctacattatttcggtgagaaatttgatgaaacaggctgtaacagcatgtgcgac
aattgtcgttcggcgaaaacatactttgatgccgaagcatcccttcttcaagtattaggt
tttattaaagagcaaggcgataagtttgatgatcagcatattatcaatgtgatgataggt
caaaataatcaaccgatatcttcttataagcatgatagccatccattatatggctctggt
aaagaattaggagtcaactattggaattctttgatccgtcaagcggagttatccgatttt
atcaaaaaggatatcgatcactacgggctattgcaattgaccgaaggaggtaaaaaatat
atcaataatccatatccgattaagtacattattaatcgtccgatggagaaagcgagctct
gatggttcagaggacactttaggtcagtcgagtacgctggacgcggagttattgaaaatg
ttgaaggatcttcgcaagaagatcgctaagcagaagtcacttcccccatttgttatcttt
caagacccttctttagaggaaatgtgtacgcattatccggtatcgacggaagagcttaag
aaaatccaaggggtagggtctggaaaagccatgaagtttggtgctccatttgtggaattg
atcaagaagtatgttgaggataacgacatcgatagaccacaggacttaatcatcaaaagt
accgcaaacaaatcggcacttaaggtgtctatcattcagaatattgaccggaaaatcagc
ttggaagatattgcctcctcgaagggaattagctatgaagacatgctgaaggaggtcgaa
tctattgttaattcgggaacgaagttgaatatcggatattttgtcgatgaaatgattgat
cccgatcgtcaagatgaggtttacgattactttaagtctgccgagaacgacagcattgat
ggcgcattgaatgagctaggtgaggaggattactctttcgaagacattcagctgatgcgt
atcaaatttatatcagaattaggaaattaa
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integrated database retrieval system
