Sphingobacterium zhuxiongii: GFH32_10485
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Entry
GFH32_10485 CDS
T06292
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphe
Sphingobacterium zhuxiongii
Pathway
sphe03030
DNA replication
sphe03430
Mismatch repair
sphe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH32_10485
03430 Mismatch repair
GFH32_10485
03440 Homologous recombination
GFH32_10485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphe03032
]
GFH32_10485
03400 DNA repair and recombination proteins [BR:
sphe03400
]
GFH32_10485
Enzymes [BR:
sphe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH32_10485
DNA replication proteins [BR:
sphe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFH32_10485
DNA repair and recombination proteins [BR:
sphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFH32_10485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DEDDh_C
GIY_YIG_2
DUF903
Motif
Other DBs
NCBI-ProteinID:
QGA26724
UniProt:
A0A5Q0QBS5
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All DBs
Position
2464601..2465995
Genome browser
AA seq
464 aa
AA seq
DB search
MKKPRYAIVDIETTGGSASASRITEIAIYIFDGKKVVEEYSSLVNPQQAIPFHIQALTGI
SDEMVENAPVFEDIAEDIYHLLGSCIFVAHNVHFDYSFVQAELKSAGYEWKAQRLCTVRL
SRKIFKGLPSYSLGKLCQSLGIIIEDRHRAAGDAKATVTLFQKLYEADSDHFIKMVEQTN
AKEQRLPTNIPGEVFNRLPHSTGIYLFKNNQGKVIYVGKAVNIKKRVISHFTGNNPGERR
QHFINEISDIDFKESGTELMAFLMECDMIKKIWPIYNRALKKYDPKYGLISYEDQNGYLR
LSVCQIRKHITPLYAFNTVLESTQFLLQLINSFALELRLCAFFNSQKGEKDGAEPSLSKE
PVDVANYNEKVLAAIESLQNNKRSFVIVDRGRHEEEKSYIYFKENKVFALGFVQNDLEIN
DIEEVVVNESLVHSNFYMNNLAINYAKEHPSRVQQLTGIPLEEA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaccacgctacgctattgtcgatattgagacgacgggaggttccgcctcggca
agtagaatcacagaaattgcgatctatatctttgatggcaagaaagtagtcgaagaatat
tcgagcttggtgaatcctcaacaagctatccccttccatattcaggcattgacaggaatc
tccgatgagatggtcgaaaatgcacccgtatttgaagatattgccgaagacatctatcac
cttttaggaagctgcatcttcgtagcccacaatgtacattttgattattctttcgttcaa
gctgagcttaaatcggcaggatacgaatggaaagcacaaagactatgtaccgtgcgctta
tcacgcaaaatattcaaaggcttaccaagttatagccttggtaaactatgtcaaagttta
ggtattattatcgaagataggcaccgcgcggctggggatgccaaagcaactgttacttta
tttcaaaaactatacgaagctgatagcgatcattttataaaaatggtcgaacagacgaat
gccaaagaacaaaggcttcctacaaatataccgggtgaagtttttaatcgacttccacat
agcaccggaatctacctatttaagaataatcaaggtaaggtaatctacgttggaaaagcc
gtcaacattaaaaaaagggtcatcagccatttcacgggcaacaaccccggagagcgaaga
cagcatttcatcaatgagataagtgatatcgattttaaagaatctggaaccgaacttatg
gcgttcctaatggaatgcgatatgatcaagaagatttggccaatttacaatcgcgcgtta
aaaaaatatgatcccaaatacggcctcattagctatgaagatcaaaatggttatctgcgt
ctatctgtatgccaaataaggaagcatatcacacccctatacgccttcaatacggtcctt
gagtccacacaattcttattgcaattgattaacagtttcgcattggaactacgattatgc
gcgttcttcaatagccagaagggggaaaaggatggcgccgagccaagcttaagcaaagaa
ccagtggatgtagcaaactataatgaaaaggtcttagcggcgatagaaagccttcagaat
aacaagcgtagctttgttattgttgatcgtggtcgacatgaagaagagaagagttacatc
tattttaaagaaaacaaggtttttgccttagggtttgttcaaaatgacctggaaatcaat
gatattgaagaagtcgttgtgaatgaaagtttagtacacagcaatttctacatgaacaat
ttagcaattaactacgcaaaagagcatccgtcgcgcgtgcaacaattaacaggaatccct
ttagaagaggcttag
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