Sphingobacterium sp. dk4302: GFH32_10565
Help
Entry
GFH32_10565 CDS
T06292
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
sphe
Sphingobacterium sp. dk4302
Pathway
sphe00300
Lysine biosynthesis
sphe00470
D-Amino acid metabolism
sphe00550
Peptidoglycan biosynthesis
sphe01100
Metabolic pathways
sphe01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GFH32_10565
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GFH32_10565
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GFH32_10565
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GFH32_10565
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphe01011
]
GFH32_10565
Enzymes [BR:
sphe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
GFH32_10565
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
GFH32_10565
Peptidoglycan biosynthesis and degradation proteins [BR:
sphe01011
]
Precursor biosynthesis
Amino acid ligase
GFH32_10565
Racemase
GFH32_10565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
DUF3258
Motif
Other DBs
NCBI-ProteinID:
QGA28232
UniProt:
A0A5Q0QJH0
LinkDB
All DBs
Position
complement(2479967..2482402)
Genome browser
AA seq
811 aa
AA seq
DB search
MYTIDLIRDILELKSCEVANYSQQITELVYDSRKVNQPEQSLFFALTAARDGHDFVNDAY
QRGVRSFVVSRSVTFLESVSDVNVLFVDDVLQALQSLAVYHRLTFQGQLVGIAGSNGKSV
VKEWLFQLLSIDKKVYQSPKSYNSQLGVALSLWNLSNHYDIALIEAGISEPGEMERLQAL
IQPEIGVFTNIGLAHAQNFESKSAKLQEKLKLFRESKALIAASKYISPGMIPEHMELYQW
GDQQSDYVCLERVELLSNSSVLQISIDQVSYTFEIPFTDKASIENILTCFTFMSYMAYAP
AVIIERLKQLRQLEMRLQLKKGIGNSSLIDDSYSNDLASLQISLDFLAQQNQHSKKTLIL
SDMDGLASSEKLQEKLRAILSRTSISRMIWVGTAYPWLSDLNGLDVTLYHSTDDLLANLD
VLAIKDETVLIKGGRTYLFEQIVQRLTLRSHGTVLEINLNALSHNLMHYRSMIPNDVKLM
AMVKAFSYGSGSFEVANLLQFSKVDYLTVAFADEGVELRMGGITLPIMVLSPDSDTFQTL
LQYDLEPEVYSMRFLNQFIDFLKDNNRKAYKIHVKLDTGMHRLGFLPTEVEGLIDRLNQQ
EEVRVQSCFTHLVASGDSKQDEYTQYQIDTYATAVAKLEQGIGYSFIKHVANTSAIVRWP
QAHFDMVRLGIGLYGVDMDSDGSQLEKVSTLQTTVTQLKELPKTETVGYDRKGILTRDSR
IATVKIGYADGYNRKFGYGVGKMKINNQLVPTVGTICMDMCMLDVTDIEVKEGDIVEVFP
DIMQASQDIGTIPYELLVNISSRVKRVYYFE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtatactattgatttaatacgcgatattttagagttaaagagttgtgaggtagcgaat
tatagtcaacaaatcacagaactagtatacgacagtagaaaggttaaccaacctgaacaa
agcttattttttgcgcttactgccgcccgtgatggtcatgactttgtaaatgatgcttac
caacggggagttcgaagttttgttgtttctagaagtgtgactttcttggagtccgtttct
gacgtgaatgtgttattcgtagatgatgtattgcaggcattacaaagcctggcagtttat
catcgattaacattccagggacaactggttggaattgcagggagtaatggcaagtctgta
gttaaagaatggctgtttcaactattatcgatcgataagaaggtttatcagagtccaaag
agttataattcgcaattaggtgtcgctttgtctttgtggaatctctcaaatcattatgat
attgcattaattgaagccggcatttccgaacccggagaaatggaacgactacaggcactg
attcaaccggaaataggtgtgtttaccaatatcggactagcacatgctcaaaactttgaa
tccaaatcggcaaaacttcaagagaaacttaagctatttagagagtcgaaagccctaatc
gcagcctcgaaatatatctctccaggaatgattccagaacatatggaattataccaatgg
ggcgatcagcaaagtgattatgtatgcttagagcgggttgaactgcttagcaatagcagt
gtgcttcaaatatcaattgatcaagtttcttatactttcgaaattccttttacagataaa
gcttccatcgaaaacatattgacctgtttcacttttatgagctatatggcttatgcgccc
gctgtaattatcgagcgattaaaacagctgagacaattagaaatgcgtctgcagctgaaa
aaaggtataggcaatagttctttaatcgatgattcatattccaatgatttagcttcccta
cagatttcactagattttcttgcacagcagaatcaacatagcaaaaagacgcttatcctc
tccgatatggatggattggcgagtagtgagaagctgcaggaaaaactgagagccatctta
tcgcgcacttcaattagtcgtatgatatgggtaggtactgcatatccatggctgtcggat
ttaaatggcttagatgtcaccttgtatcactctacagatgatttactggcgaatttggat
gttttagcaatcaaagatgagactgtattaattaaggggggaagaacatatcttttcgaa
caaatcgtacagaggctgaccttgcgttcgcatggaacggtattggagatcaatctcaat
gcgctgtctcataatttgatgcattatcgatccatgatccccaatgacgttaagttgatg
gccatggttaaggcattttcttatgggagtggtagttttgaagttgccaatctcttacag
ttcagtaaagttgattatctaacggttgcattcgctgatgaaggcgtagaattaaggatg
ggagggattacactgccgattatggttttaagtccggatagcgatacatttcaaacttta
ttgcaatatgacctagagccggaagtgtattctatgcgtttcttgaatcaatttattgac
ttcttaaaagataataatagaaaggcttacaagattcatgtgaagttagatacaggcatg
catagattagggtttttaccgacagaggttgaaggactaattgatcgattgaatcagcag
gaagaagttagggtgcagtcttgttttacgcatttggtggcttctggcgactcgaaacaa
gatgagtatacccaatatcaaattgatacatatgctaccgctgtagccaagctagagcag
ggtatcggctattcttttatcaaacatgtagcaaatacgtcagcgattgtacgctggccg
caagcacatttcgatatggtacgccttggaattggcctctatggtgtcgatatggattct
gacggtagccaattagagaaagtgagtacattgcaaacgacagtcacgcagttgaaggaa
ttaccgaagactgagacggttggatatgatcgaaaaggtattttgactagagatagtcga
attgctacagttaaaattgggtatgctgacggatataatcgtaaatttggatacggtgta
ggaaaaatgaagattaataaccagcttgttcctacagttggcacgatctgtatggatatg
tgtatgttggatgtaacagatatcgaagtgaaagaaggagatattgtggaagtttttcca
gatatcatgcaagcttctcaagatatcggtacaattccttatgaattattggtaaatatc
tcaagtcgagtgaaaagagtctattattttgaataa
DBGET
integrated database retrieval system
