Sphingobacterium zhuxiongii: GFH32_13020
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Entry
GFH32_13020 CDS
T06292
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphe
Sphingobacterium zhuxiongii
Pathway
sphe00061
Fatty acid biosynthesis
sphe00071
Fatty acid degradation
sphe01100
Metabolic pathways
sphe01212
Fatty acid metabolism
sphe02024
Quorum sensing
sphe04146
Peroxisome
Module
sphe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GFH32_13020
00071 Fatty acid degradation
GFH32_13020
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GFH32_13020
09145 Cellular community - prokaryotes
02024 Quorum sensing
GFH32_13020
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphe01004
]
GFH32_13020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphe04147
]
GFH32_13020
Enzymes [BR:
sphe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GFH32_13020
Lipid biosynthesis proteins [BR:
sphe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GFH32_13020
Exosome [BR:
sphe04147
]
Exosomal proteins
Exosomal proteins of breast milk
GFH32_13020
Exosomal proteins of breast cancer cells
GFH32_13020
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QGA27181
UniProt:
A0A5Q0QE21
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All DBs
Position
3095293..3097053
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AA seq
586 aa
AA seq
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MNKFKRLFDIIINYKTEFAKDIMVAGRSGDNWKTYSTADFVDIVNNLSKGLLARGIKKGD
RIAIMSGNRPEWNFVDFACNQLGVATVPLYPTLSSQDLVYIINDAEVKMLFVSNEDLADK
ADMAMKENNIDIETYTFDKLEGRKLFLEVAELGKSQEIDLQPYNDAVDADDLLTLIYTSG
TTGKPKGVFLSHENLLSNVQACNHLITDDYKKALSFLPLCHIFERMVVYMYFSRGVQIYY
AENLDNIVADINDVKPDLFTTVPRVLEKVYDKVVAKGKDLTGIKKSLFFWALDLGLKYQE
PLKNSAWYNFQLGIARKLIFSKWQEALGGNIKTIISGGAALQERLARVFWAAGIKVLEGY
GLTETSPVIAVNSWKDEDVKFGTVGRVLKNLDVKIAQDGEIMVKGPSITKGYYKNDEATK
EAFDEAGYFHTGDIGELTPDGFLRITDRKKEMFKTAGGKYVAPQVLENKLMESTLIAQVM
VIGENQRFPAALIVPAFEELEKYCKHKGIPFSSKQEAIKQGEVLTKYEQIISQAMANFGH
WEQVKKFKLLDKEWTIDNGELTPKLSLKRKVILQKNEELIKDIYKE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaataagttcaaaagattatttgatattatcataaactataagacagaatttgcaaaa
gacatcatggttgctggacgttctggcgacaattggaaaacatattctactgcagacttt
gttgatatcgtaaataacctgagtaaaggattactagctcgaggaattaagaaaggagat
cgtatcgctatcatgtcgggaaaccgtcctgaatggaattttgtcgattttgcttgtaat
caacttggtgttgcaactgtacctctatatccaacgctctctagtcaagatttagtctac
atcatcaacgatgcggaagttaagatgctatttgtaagtaacgaagatcttgcggataag
gctgatatggcgatgaaagagaataatatcgacattgagacctatacttttgacaaatta
gagggacgtaaattatttctcgaagtcgcagaattagggaaatcacaggaaattgattta
caaccctataatgatgctgtagacgccgatgacttactaacgttgatctacacttcagga
acaaccggaaaacctaaaggcgtcttcctgtcgcatgaaaatttactgagcaatgttcaa
gcctgtaatcatttgatcaccgatgactacaagaaggcgttaagcttcttaccgctttgt
catatattcgaacgtatggttgtatacatgtatttctcacgtggtgtacagatctattat
gctgaaaatctcgataatatcgttgccgatatcaatgatgttaaacctgatttatttaca
actgttccacgtgtactagagaaggtttatgataaagtggttgctaaaggcaaagactta
acaggtattaaaaaatcactattcttctgggcattagatcttggactcaaatatcaagag
ccgctgaagaactctgcttggtataactttcaattaggaatagcaagaaaactcatattc
tctaaatggcaagaagccctaggaggtaatatcaaaacgatcatatcaggaggtgccgcc
cttcaagagcgtttagcacgtgtcttttgggcagcaggaattaaggttctagagggctat
ggactcactgaaacatccccagtaattgctgtgaactcttggaaagacgaagatgtgaaa
tttggaacggttgggcgtgtcttaaagaatttggatgtgaaaattgcgcaagacggcgaa
attatggtcaaagggccaagtattaccaaaggctactataaaaatgatgaggctacaaaa
gaagcattcgatgaggctggatatttccatactggagatatcggcgaattgacacctgat
ggcttcttacgcatcaccgatcgtaaaaaggaaatgttcaaaactgctggtggtaaatat
gttgccccgcaagtacttgaaaataaattaatggaatccactttaatcgcacaagtaatg
gtcatcggtgagaatcagcgtttccctgctgcattgatagtccctgctttcgaggaattg
gaaaaatattgtaaacataaaggcatcccattcagctcgaagcaagaagcaattaagcag
ggggaagttttaacaaaatatgagcaaattatttcacaggcaatggctaactttggacat
tgggaacaagtgaagaaattcaaacttctcgataaggaatggaccattgacaacggcgag
ctaacacctaagttaagcctaaaacgcaaggttatccttcagaaaaatgaagaattaatt
aaagatatttataaggaataa
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