Sphingobacterium zhuxiongii: GFH32_13080
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Entry
GFH32_13080 CDS
T06292
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sphe
Sphingobacterium zhuxiongii
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphe03009
]
GFH32_13080
Enzymes [BR:
sphe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
GFH32_13080
Ribosome biogenesis [BR:
sphe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GFH32_13080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QGA28262
UniProt:
A0A5Q0QJI6
LinkDB
All DBs
Position
3110756..3112294
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AA seq
512 aa
AA seq
DB search
MPFSSNRNSREDNSKKPRSSSDSFRGDKRSSFNSSRDSKSGKPDQDRKFNKFDKSGSRDN
KFEKFPREGKFDNRNRDDKFDRSNRDGNSERPARDNKFERPNRDGKFDRTSRDNKFDRSS
RDNKFDRPARDNKFDRSSRDNKFDRPARDNNFDRPARDNNFDRPSRDNNFDRPSRDNKFD
RPARDNKFDRSSRDNKFDRPSRDNKFGKPQGDRKFGKPRFGSNDDKGFGDKRPSRRFDEA
GQDRDSRDRRDNRSDGRTRKPISEKKYNVDANDDGLIRLNRYIANSGICSRRKADELIEA
GVISVNGEVVTELGSKVDPATDEIRYNDERLKREKMVYVLLNKPKDYITTTDDPQERKTV
MHLVSKATKERIYPVGRLDRNTTGLLLLTNDGNLAEKLSHPRNNISKIYQVELSKNLTQG
DFNKIQFGIELEDGLIKPDDLSYVVGASKREVGIQIHSGKNRIVRRIFESLGYEVVKLDR
VVYANLTKKDLPRGRWRYLEEKEIVQLKHLMK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccattcagtagcaacaggaacagtcgagaggacaactccaaaaaaccaagaagcagc
tcagatagcttccgtggggataaaagatcatcttttaactcttcaagagattctaaatct
ggtaaaccagaccaagaccgcaaattcaacaaattcgataaatcaggttcgcgcgataat
aaattcgagaagtttccacgtgaaggaaaattcgacaatagaaatcgtgatgacaaattt
gaccgctcaaacagagacggaaattctgaaagaccagctcgagataacaaatttgaacgc
ccgaacagagacggaaaatttgatagaacatctagagataataaattcgacaggtcgtca
agagacaataaatttgacagaccagcaagagataacaaattcgacaggtcatcaagagat
aataaattcgacagacctgctagagataacaacttcgatagacctgctagagacaataac
tttgacagaccatctagagataataacttcgatagaccgtctagagacaataagttcgac
agacctgctagagacaataagttcgatagatcgtctcgagataataaattcgacagacca
tctcgcgataacaaatttggcaaaccgcaaggggaccgtaaatttggcaaaccaagattt
ggcagtaacgacgacaaaggattcggagacaaacgcccttctcgtagatttgacgaagcc
ggacaagacagagactcacgcgatcgtagagataatcgttcagatggacgtacaagaaag
ccaatttcagaaaagaaatataatgtagatgccaacgatgacggattaatacgtttgaat
cgttacatcgcaaattcaggaatttgttctcgtcgtaaagcagatgaactaattgaagct
ggtgttatcagcgttaatggtgaagttgtgactgaattaggatcaaaagtagatccagct
actgatgaaattagatataacgacgagcgtttaaaacgcgagaaaatggtttatgtactt
ttaaataaaccaaaagattatatcacgactacagacgatccacaagagcgtaaaaccgta
atgcacttagtttcgaaagcaacaaaagaacgtatttaccccgttggtcgcttagataga
aatactacaggcttattattattaactaatgatggtaacctggcggagaaactttctcat
ccaagaaataatattagcaaaatctaccaagttgaattaagcaaaaacttaacacaggga
gatttcaataaaattcagttcggtattgaactagaagatggattaatcaaaccagacgac
ttaagctacgttgtaggagcttcaaaacgtgaagttggtattcagatacattctggcaaa
aacaggatcgtacgccgcatctttgaatccctaggatatgaagttgttaagcttgatcgt
gttgtatatgcgaacctaacaaaaaaagatctaccacgtggtcgttggagatatctagaa
gaaaaagagattgttcaattgaaacatcttatgaaataa
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