Sphingobacterium zhuxiongii: GFH32_13325
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Entry
GFH32_13325 CDS
T06292
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sphe
Sphingobacterium zhuxiongii
Pathway
sphe03030
DNA replication
sphe03430
Mismatch repair
sphe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH32_13325 (holA)
03430 Mismatch repair
GFH32_13325 (holA)
03440 Homologous recombination
GFH32_13325 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphe03032
]
GFH32_13325 (holA)
03400 DNA repair and recombination proteins [BR:
sphe03400
]
GFH32_13325 (holA)
Enzymes [BR:
sphe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH32_13325 (holA)
DNA replication proteins [BR:
sphe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFH32_13325 (holA)
DNA repair and recombination proteins [BR:
sphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFH32_13325 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
HP_1247_M
E1-N
Motif
Other DBs
NCBI-ProteinID:
QGA27229
UniProt:
A0A5Q0QDC9
LinkDB
All DBs
Position
complement(3171047..3172054)
Genome browser
AA seq
335 aa
AA seq
DB search
MNTQSILTDIKKKKLSPVYLLHGEEPYFIDLISDAIEHQVLDEAQKGFDQSVVYGKETDF
STLISMAKRYPMMSDYQVIIVKEAQNLKWKDDELLQKYLEHPTPTTVLVFAHKYSKFDKR
KKSYKTLDKVGVVVESNKLYEDKVSGWINEQLSAAGRKIHPQAAAMMADYLGTDLSKVAN
ELEKLMLNVSAEQEISAADIERNIGISKDFNVFELNTALSKRNSLKAFQIVNYFAANPKS
NPIPVVIGSLGTYFTKILKYHYLPDKTSAAAAKALGVHPFFVKEYEYAARNFNRRKTFDI
IHLIKEYDLKSKGMNVGPMTNHGDLMSELIYKILN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccaatccattttaactgacatcaagaaaaagaagcttagtcctgtctattta
ttgcatggcgaagagccttattttatcgatctaatttcggatgctattgaacaccaagtg
ctggatgaagcgcagaaggggtttgatcaatctgttgtgtacggtaaggaaactgatttc
tcgacgctaattagtatggcgaagcgctatccgatgatgagcgattatcaagtgattatt
gtaaaagaagcgcagaatttaaaatggaaagatgatgaattattacagaaatacttagag
catccaactccaacgacggtattggtttttgcgcataagtacagtaagttcgataagcgg
aaaaagtcctataaaaccttggacaaggttggcgtcgtggtcgaatcaaataagctatat
gaggataaagtttctggctggataaatgagcaattgagtgctgccgggcgaaagatacat
ccacaagccgcagcaatgatggctgattatctcggaacggatctttccaaagtggccaat
gaattggaaaaattgatgctaaatgtatccgcagaacaagaaattagtgctgcagatatt
gagcgtaacatcggtattagtaaagactttaatgtgttcgaattgaataccgcattgtca
aaacgtaattcgcttaaagcctttcaaatagtaaattatttcgctgcaaaccccaaatca
aatcctattcctgtcgttattggttctttaggtacttattttacgaagattcttaaatat
cattatttaccagataagacctctgcagcggcggcaaaagccttaggtgttcatcctttc
ttcgttaaagaatatgaatacgctgcgcggaatttcaaccgaagaaagacattcgatatt
attcacttaattaaagaatacgatttgaaatccaaaggaatgaatgtaggacctatgaca
aatcatggggatttgatgagtgaattaatttataaaatattaaactaa
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