Sphingobacterium zhuxiongii: GFH32_16240
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Entry
GFH32_16240 CDS
T06292
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sphe
Sphingobacterium zhuxiongii
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphe02000
]
GFH32_16240
Transporters [BR:
sphe02000
]
Other transporters
Pores ion channels [TC:
1
]
GFH32_16240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
MetallophosN
DUF7754
CooC_C
Motif
Other DBs
NCBI-ProteinID:
QGA27774
UniProt:
A0A5Q0QEQ5
LinkDB
All DBs
Position
complement(3847877..3851002)
Genome browser
AA seq
1041 aa
AA seq
DB search
MYNNYDSRPGLSNLASCRMNSKILSIIASFLVMGTAHANTAIPSSESSIYNTISKQTTVS
GKVTDGNGPVRGVSVAVKGVSGAGTTTDANGEFSVQIDNPNATLVFTMVGFTTQEVPLRG
QSNVNVNLSSADTDIEQVVVIGYGTKKKSDLTGSVSSVGSEKINAFPLAGTAQALQGRAP
GVSVSSVNGEPGKAPRVRVRGGTSINASSDPLYVVDGFPGSTPPAPEDVESIEILKDASA
TAIYGSRGANGVIMITTKKGKIGKPMVEFNNSVATQQVGKRLDLLNASEFAAYINDVYVN
GGNNNVPFADPSSLGEGTDWQDLVFRNGNLLSNQLSVSGGSDNIRYYTAVNHYGQKGTVI
ESDFRRFSATSNLDMKVSDRIKIGTRLLYNRNLLNGVRTQESSSGTTAAGVISGALRFEP
TQGVYDDAGKYTIKKFGDPHDNPVAAAKERQNEVKTDLFQGNGYLELTLLKDLIFRSTLG
LQVSNQRTGNYVSKLLVEGRNAGGIGSIASHKNTNVISENYLNYNLKINEANNLDAMVGY
SYQSSRNETWQANNRNFISDSFSYWNLGAGSNYQNASSNLEDWVMSSFYGRINYNLLGRY
LFTATGRYDGSSRFGENNKWAFFPSAAFAWNVSQEPFMESVEAISNLKVRTSYGETGNSE
IGSYQSLARYSATLTTMGGVPVNAVRPTNVANPNLTWETTKQTDAGIDIGFLKNRINLTV
DYYYKKTVDLLYSVPLPIYSGYTGSLQNVGSVENKGWEFSLGTTNIDKELKWNTDFNITF
NRNKILELPGGDILYNTIPGHMLSTDSQILREGQVVGAFYGWEFDGVYQQGDDFSPQPSK
KPGDVKYKDIFGRDASNHLVAGADGKVNADDRTIIGNPHPDFIFGFNNDFRYKNFDLNIF
FQGSYGNDMLNITRMELDWMAGKGNATKEALNRWTPTNTNTNVPRASASNNPEVSSRWVE
DGSYLRLKNLALGYNVPKTAIAKMGIDQLRFFASAQNIWTWTNYSGFDPEVSFQDSNRNI
GLDYMGYPNIKSFTFGINARF
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaattatgattcgcggccaggtttaagtaatctggcatcctgtaggatgaac
agtaaaatcctgtcgatcattgcgtcattcctcgtgatgggaacagcgcatgctaatacc
gcaattcctagttctgaaagcagtatttacaacacgattagcaagcaaaccaccgtgagt
ggaaaggtaacagatggcaatggtcctgttcgcggggtttctgttgctgtgaaaggtgtt
tcaggggctggaacgactacagacgcaaacggggagtttagcgttcaaatcgataatcca
aatgcaacgcttgtttttacaatggttggatttacgacacaggaagtgccgttaagaggg
caaagtaatgtcaatgttaatttatcttctgccgatactgatatcgaacaagttgtcgta
attggatatggtaccaagaaaaaaagtgatttaacaggctctgtatcatcagtgggttct
gaaaagattaatgcctttccattagcaggaactgctcaagcactacaagggcgtgcgccg
ggtgtttctgtatccagtgtaaacggagaaccaggtaaagcaccgagagttcgtgttcgt
ggaggtacttccatcaacgctagttctgatccattatatgtagtggacggtttcccgggt
agtaccccaccagcacctgaagacgttgaatctatcgaaatattgaaggatgcgtccgca
actgcaatctatggttcaaggggagcaaatggcgtaattatgattacgaccaagaaaggg
aaaattggaaaaccaatggttgagttcaataactctgtcgcgacacaacaagtcggcaaa
agacttgatctgttgaatgcatcagaatttgcggcttatatcaatgacgtttacgtcaat
ggcggtaacaataatgttccgtttgctgatccatcgtcattgggcgaggggactgattgg
caagatttagtttttagaaatggaaatttattgagtaatcaattgtccgtgtctggagga
agcgacaatattcgctactatactgcggtaaatcactatggtcaaaaaggtactgtgata
gaatctgacttccgccgtttctccgctacttcgaatttggacatgaaagtttcggatcgt
attaagattggaactcgacttctctacaaccgtaatctcctcaatggtgtaagaactcag
gaaagtagtagtggtacgacagcggccggcgtaatatcaggtgctttgcgctttgagcct
actcagggagtgtatgacgacgcagggaagtatactataaagaagtttggggatccgcat
gataatcccgtagcggcagcgaaagagcgtcagaacgaggttaaaacagatttgtttcaa
ggtaacggatatttagaactaacccttctcaaggatttgattttccgtagtactttggga
ttacaagtaagtaatcaacgcacaggtaactatgtttctaaattattagttgaaggaaga
aatgctggaggtatcggatcgatagcatcgcataaaaatacgaatgtcatcagtgagaat
tacttgaactataatttaaagattaatgaggcaaataatttggatgccatggttggatat
tcctaccaaagctctagaaatgaaacttggcaagccaataatagaaactttatctccgat
agcttttcatattggaatttaggcgcaggttcaaactaccaaaatgcatcatcgaatttg
gaagattgggttatgtcttcattctacggacgtatcaactataatttattaggaaggtat
ttatttacggcgacaggacgttatgatggttcttcgagattcggtgaaaataataaatgg
gcattctttccatccgctgcatttgcgtggaatgttagtcaagagccttttatggaatcg
gtcgaagcgatatctaacttaaaagtgagaaccagttatggtgaaacagggaattccgag
attgggtcttatcaatctttagcgcgctattcagcgacgttgacaacgatgggcggtgtt
cctgttaatgctgtgcgcccaaccaacgtagctaaccccaatttaacgtgggaaactacg
aagcaaacggacgcaggtattgatatcgggtttttaaaaaaccgtatcaacttaacggtg
gactattactacaaaaaaacagttgatttactttactcggtgcctttacctatttattcg
ggttatacgggatctctccaaaacgtcggaagtgtagaaaataaaggatgggaattctcc
ttaggaacgacaaatattgataaggaattaaaatggaataccgatttcaatattacgttc
aacagaaataaaatcttagaacttccaggtggcgatattctttacaatacgattcctgga
catatgctttcaacagattcgcaaatcttacgcgaaggacaagtggtgggcgcattctac
ggatgggaatttgatggagtttatcaacaaggtgatgattttagtccgcaaccaagtaag
aaaccaggggatgtgaaatataaggatattttcggtcgtgatgcttcaaatcatttagtc
gctggagcggacgggaaggtaaatgctgatgatagaaccattatcgggaatcctcatcca
gactttatcttcggcttcaataatgattttcgatacaagaatttcgatttaaatatcttt
ttccaaggctcatacggtaatgatatgttaaacattacaaggatggaattagattggatg
gcaggaaaaggtaatgctacgaaagaggcattaaatcgatggacaccaaccaatacgaac
acgaatgtaccacgtgcgagtgcttcgaataatccagaagtatcctcaagatgggtcgaa
gatggatcctacttgcgtttgaagaacttagccttaggctataatgttccaaagacagcg
attgcgaagatgggtattgatcaacttcggttctttgcgagtgcgcaaaatatatggact
tggacaaattactctggcttcgatcctgaagtaagtttccaagattctaaccgtaatatt
ggcttggattacatgggttatccaaacatcaagtcatttacatttggtattaacgcaagg
ttttaa
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