Sphingobacterium zhuxiongii: GFH32_17285
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Entry
GFH32_17285 CDS
T06292
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sphe
Sphingobacterium zhuxiongii
Pathway
sphe00521
Streptomycin biosynthesis
sphe00523
Polyketide sugar unit biosynthesis
sphe00525
Acarbose and validamycin biosynthesis
sphe00541
Biosynthesis of various nucleotide sugars
sphe01100
Metabolic pathways
sphe01110
Biosynthesis of secondary metabolites
sphe01250
Biosynthesis of nucleotide sugars
Module
sphe_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GFH32_17285 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GFH32_17285 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GFH32_17285 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GFH32_17285 (rfbB)
00525 Acarbose and validamycin biosynthesis
GFH32_17285 (rfbB)
Enzymes [BR:
sphe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GFH32_17285 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
NmrA
tRNA-synt_1f
Ytp1
Motif
Other DBs
NCBI-ProteinID:
QGA27974
UniProt:
A0A5Q0QF90
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Position
complement(4119569..4120621)
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AA seq
350 aa
AA seq
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MKKCILITGGAGFIGSHVVRHFVLKYPKYQVVNVDSLTYAGNLENLKDIETATNYKFEKA
DITDRHSLHELFNKYRPDGVIHLAAESHVDRSISNPLAFVHTNVVGTVNLLEEARHAWKD
SFVDKRFHHISTDEVFGSLGTNGLFSEETKYDPHSPYSASKASSDHFVRAYHDTYGLPIV
ITNCSNNYGPNHFPEKLIPLCITNILEGKALPIYGDGKYTRDWLYVVDHARAIDLVFHKG
VDGSSYNIGGFNEWQNIDLVRELCRQMDEKLGREVGTSESQITFIKDRPGHDLRYAIDAS
KIKNELGWKPSVTFQEGLALTIDWYLNNQDWLRKVLTGDYQDYYSDHYSK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtgcattctaatcaccggcggagctggctttattgggtcacatgttgttcga
cattttgttttaaaataccctaaatatcaggttgttaatgtggattcgttgacctatgct
ggaaacttagagaatcttaaggatattgaaacagcaacaaattataagtttgaaaaagct
gatataactgatcgtcattcacttcatgaattatttaacaaatacaggcccgacggcgtg
attcaccttgctgcagaatcccatgtcgatagatctatttcaaatccgttggcctttgtt
catacgaatgtagttgggacagtaaacttgctagaggaagctagacacgcttggaaagac
agttttgtagataagagatttcatcacatatctacggacgaagtatttggatctctgggg
acaaatggattgttttcggaagaaacaaaatatgacccacattcgccctattcagcgtca
aaggcctcttctgaccatttcgttagagcgtatcatgacacctatggactcccaattgtg
ataacgaattgttcaaacaattatggtccaaatcattttccagaaaaactgatcccgctc
tgcattaccaatattttagaaggtaaagcattgccgatatatggcgatggcaaatataca
agagactggctctatgtggtcgaccatgcacgagcgattgatttggtttttcataaggga
gtagatgggagctcatataatatcggcgggtttaatgaatggcagaatatcgatcttgtt
cgagaattgtgtaggcaaatggatgagaagcttggtcgtgaagttggaacctccgaatcc
caaattacttttattaaagatcggcctggtcacgacttgcgttatgctatagatgcctct
aaaattaaaaacgagctaggttggaaaccgtccgtgacttttcaagaggggctagccttg
acgatcgattggtatcttaacaatcaagattggttgagaaaggttctaactggagattat
caagactattattccgatcattattctaaatag
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