Sphingobacterium zhuxiongii: GFH32_17760
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Entry
GFH32_17760 CDS
T06292
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sphe
Sphingobacterium zhuxiongii
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphe03019
]
GFH32_17760
03009 Ribosome biogenesis [BR:
sphe03009
]
GFH32_17760
Messenger RNA biogenesis [BR:
sphe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GFH32_17760
Ribosome biogenesis [BR:
sphe03009
]
Prokaryotic type
rRNA processing factors
GFH32_17760
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QGA28059
UniProt:
A0A5Q0QFI2
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Position
complement(4229727..4231280)
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AA seq
517 aa
AA seq
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MVKELIIDSVPDKGVTIALLQDKQLVELNREQADNNFAVGDIYLGRVKKIMPGLNAAFVD
VGYEKDAFLHYLDLGPQVQSLLKLTRVVKNGSYQEKLLNSLKLEKDIDKAGKISDILSRN
TLLPVQIAKEPISTKGPRLSSDLSIAGRFVVLVPFSSSVSISKKIKGSAERNRLKKIVES
IKPANFGVIIRTVSEGKGVEEMQKDLLDLISKWELFTKRLKSAEPPQKVLGEMDRASTIL
RDILTDEFSHIYVNDADIFDEVKSYIQEISPDLEKIVKHYKGKEPIFDHFGVERQIKASF
GKTVNLQGGAYLVVEHTEALHVIDVNSGNRIANKENQEDNALLVNKEAAKEIARQLRLRD
MGGIVVIDFIDMHKATNRKELYGFLKECMASDRARHTILPPSKFGLVQITRQRVRPEMSI
VTNEKCPACDGTGEIRSSIVLLDDIENNLSFILQEQNEKGVTLCVHPYIAAYITKGFVSR
RLKWFFKYGKWIKVKEMSSYYLTEFRFFNAKDEEIKL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaggaattaattatcgattcagtccccgataagggggtgactattgctttacta
caggataagcagctggttgagctaaaccgagagcaagcagacaataattttgcggtagga
gatatctacttaggtagagtaaagaaaatcatgcccggtctgaatgccgcattcgtagat
gtaggatacgaaaaggatgcatttttgcattatcttgatcttgggcctcaagtacagtcg
ctgcttaaactcacaagagtagtaaagaatggcagttatcaagagaaactgctcaatagt
ttgaaacttgaaaaggacattgacaaagctggaaaaatatcggatattctgagccgtaac
acgctgttgccagtgcaaattgcaaaagaaccgatatctacaaaaggaccgaggttaagc
tcagacttatccattgctggtcgatttgtagtgttggtacctttctcaagttcggtttcc
atttccaagaaaattaagggaagcgccgaaagaaatagacttaagaaaatcgttgaaagc
attaaacctgctaattttggcgtaatcattcgaacagtctctgaaggcaaaggggtagaa
gaaatgcaaaaagatctactcgacctgatttctaaatgggaactatttaccaaacgtctt
aaatctgctgaacctcctcaaaaagtattaggtgaaatggatcgcgcttcaacgatattg
cgcgatatacttaccgacgaattctctcatatctatgttaatgatgcagatatctttgat
gaggtcaaatcatatatacaggagatttctcccgatctagaaaaaatagttaaacactat
aaaggtaaagaacctattttcgatcatttcggtgtagagaggcaaattaaggcgtccttc
ggcaaaactgtcaacttacaaggtggtgcttatctggttgttgaacatacagaagcatta
cacgtgattgacgtcaatagcggtaatcgcattgccaataaggaaaatcaagaagataac
gcacttctagtaaataaagaagctgcaaaagaaattgcccgacagctaaggcttagggat
atgggtggtattgtggtaattgattttatcgatatgcacaaagcaaccaatagaaaagaa
ttgtatggattcttaaaagaatgtatggcaagtgatcgtgcgagacatactattcttcct
cctagtaaatttggattagtacagattactagacaacgcgtaaggccagaaatgagcatc
gtgacaaatgaaaaatgtccggcttgtgatggtaccggcgaaattagatccagcatcgtt
ttactggacgatattgagaataatttaagcttcattttacaagagcagaacgaaaaagga
gttacgctatgtgtacatccttatattgcggcctacattaccaaaggttttgtctctaga
aggttaaaatggtttttcaaatatggaaaatggattaaagtgaaggagatgtcatcttat
tatttgacagagttccgcttctttaatgccaaagacgaagaaattaaactttag
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