Sphingomonas sp. FARSPH: DM480_00055
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Entry
DM480_00055 CDS
T05685
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf00071
Fatty acid degradation
sphf00362
Benzoate degradation
sphf00650
Butanoate metabolism
sphf01100
Metabolic pathways
sphf01120
Microbial metabolism in diverse environments
sphf01200
Carbon metabolism
sphf01212
Fatty acid metabolism
Module
sphf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DM480_00055
09103 Lipid metabolism
00071 Fatty acid degradation
DM480_00055
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DM480_00055
Enzymes [BR:
sphf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DM480_00055
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Pyr_redox_2
F420_oxidored
Pyr_redox
FKBP_N
TrkA_N
ApbA
Motif
Other DBs
NCBI-ProteinID:
AXJ94124
UniProt:
A0A345WKC2
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All DBs
Position
6830..8842
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AA seq
670 aa
AA seq
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MTSPIRTERHDDVLVIISNNPPVNALGAAVRQGLEAAIKDGEVDGAIAAMVIRCDGRTFF
AGADITEFGKPPVEPMLPTVVDMIEACTKPVVAAIHGTALGGGCEVALGCHYRVAVPSAK
LGTPEVKLGLLPGAGGTQRLPRLAGVALALEMTAKGDPISAKKAEAAGLIDRIVGEDSLE
ADAIAFAREVAAKRRIPRASEKEAKADPAAVEAFRKDNARRFRGFDAPAANIACVVKATE
VPFREGLAFERQEFMKLMMGTQSAAQRHIFFAERQAAKIDDIPSDIALRPINRVGVIGAG
TMGGGIAMNFLSAGIPVTIVEMAQEALDRGTGVIRKNYEATAAKGRMKPEQVEAAMNALT
PTLDFGALATCDLIIEAVYENMDVKKEIFTRLDGIAKQGAILASNTSYLDIDEIAACTKR
PGDVLGMHFFSPANVMKLLEVVRGAQTAPDVLATVMALAKKIRKVAVVAGVTYGFIGNRM
LMPRQVEANKLLLKGATPEQIDRVHVAFGMPMGPFQMADLAGVDIGWHRDPNRIENIRDA
LAAEGRWGQKKQAGFYDYDEKRNPTPSPRVAEIIQEWRDKTGTPQHDVTDEEIVERTLYP
MVNEGALILEEGKAQRASDVDVVWIYGYGWPVYRGGPMFWAKSEGYDKVVAGLEKHGFAV
AQSLKSGSIK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccccgatccgcaccgaacgccacgacgacgtgctcgtcatcatttcgaacaat
ccgccggtcaacgcgctgggcgcagcggtccgccaggggctggaggcggcgatcaaggac
ggcgaggtcgatggtgcgatcgcggcgatggtgatccgctgcgacggtcgtaccttcttc
gcgggcgcggacatcaccgaattcggcaaacccccggtcgaaccgatgctgcccacggtc
gtcgacatgatcgaggcgtgcaccaagccggtcgtcgccgcgatccacggcacggcgctg
ggcggcgggtgcgaggtggcgctgggatgccattatcgcgtcgcggtgccctcggcgaag
ctcggcacgccggaggtgaagctcggcctgctgcccggcgccggcggtacgcagcggctg
ccgcgtctcgccggtgtcgcgctggcgctggagatgaccgcgaagggcgatccgatcagc
gcgaagaaggcagaagccgctgggctgatcgaccggatcgtcggcgaggacagtctggaa
gcggatgcgatcgcctttgcgcgcgaggttgcggccaagcgccggatcccgcgcgcctcg
gaaaaggaggcgaaagccgatcccgccgcagtcgaggcgttcaggaaggacaacgcccgc
cgcttccgcggcttcgacgcgcctgccgccaacatcgcctgcgtcgtcaaggcgacagag
gtcccgttccgtgaaggcctggcgttcgagcggcaggaattcatgaagttgatgatgggc
acgcagtccgcggcgcagcgccacatcttcttcgccgagcggcaggccgccaagatcgac
gacattccatcggacatcgcgctgcgcccgatcaatcgcgtcggcgtgatcggcgccggc
actatgggcggcggcatcgcgatgaattttctgtccgcgggcatccccgtcacgatcgtc
gagatggcgcaggaggcgctcgaccgcggcacgggcgtcatccgcaagaattacgaggcg
accgcggctaaggggcggatgaagcccgaacaggtcgaggcggcgatgaacgcgctgacc
ccgacgctcgatttcggcgcgctcgcgacgtgcgatctcatcatcgaggcggtgtatgag
aatatggacgtcaagaaggagattttcacgcggctggacgggatcgccaagcagggtgcg
atccttgcgagcaacacgtcctacctcgacatcgacgagatcgccgcctgcaccaaacgg
ccgggcgatgtgctgggcatgcatttcttctcgcccgccaacgtcatgaagctgctcgaa
gtcgtacgcggcgcgcagaccgcgcccgacgtgctggcgacggtcatggcgctcgccaag
aaaatccggaaggtcgcggtggttgccggcgtcacctatggcttcatcggcaaccgcatg
ctgatgccgcgccaggtcgaagcgaacaagctgctgctcaaaggcgcgacgcccgaacag
atcgaccgcgtccacgtcgccttcggcatgccgatgggaccgttccagatggcggacctc
gccggcgtcgacatcggctggcaccgcgacccgaaccggatcgagaacatccgcgacgcg
ctcgccgcggaggggcgctggggccagaagaagcaggccggcttctacgattatgacgag
aagcgcaatccgaccccctccccgcgcgtcgccgagatcatccaggaatggcgcgacaag
accgggacgccgcagcacgatgtcaccgacgaggagatcgtcgaacgcacgctctatccg
atggtcaacgaaggcgcgctgatcctggaggaaggcaaggcgcagcgggcgagcgacgtc
gatgtcgtctggatctacggctacggctggccggtctatcgcggcggcccgatgttctgg
gcaaagagcgaaggctacgacaaggtcgttgccgggctggagaagcatggcttcgccgtc
gcgcagagcctgaagagcggcagcatcaagtaa
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