Sphingomonas sp. FARSPH: DM480_00215
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Entry
DM480_00215 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_00215
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_00215
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AXJ94151
LinkDB
All DBs
Position
complement(46460..49276)
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AA seq
938 aa
AA seq
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MKGSHARLLFGASVAALSFQAAGIAQAQAAQATGNVTADQAAQGTPGDQDIVVTGVRESL
RSAQAIKRNANQIVDSVNAQDIGKLPDANTVEALQRITGVQIQRRYGEGATDFDHRTTPA
ITVRGLTQVSNFIDGRAAISASGGRTLDLEAIPPELLAGIDVFKNPPASTIEGDVAGVVN
IRTRLPFDQPGQLISATLKGNYYDRADKFGGSGSALYSNRFQTGIGEMGFLLNASYARSS
YRQDAILIGAFGPIPAGTTIPGAPANAQVPYGEQIYDDGGNRNRLGLAGAWQWQAADNLL
VTAQALYSRYKFYRQGKYFYYNNNGNGPTTPLAGANFTFDSAGYATSGSLANQVFESARF
DQDLTNTTGNYTLNAKWDVSDKLHAVFDAQYLKSSYNADRNGFVISLYDQTGQTPYNAKN
QSIVDFDLRGSRPVWNVRNPALLSDPNNYAFTYMADSITRNDADQLALKYDLEYDVEGGF
LQKLRGGLRYADSTIDLRGTWNGFCLLPSGPNPSCSSPAGLPFVRLSQFPELALKGPTPN
FFDGKTLPGGILYPNFEPGNSLWDSLVKTEAKFGATPKSTFSPGDLNHQTERTLATYVAA
DYEGVIGGLKVDGNAGVRLVRTSTGSSGTIFNSNGTQAPIDVQRRYVKALPSFNVRAHIT
DTFQTRFAFSKSFARPNFDQMATNVSLNNPTDRSFIRRDANGNIIEQLPTGGSGNPYLRP
ITSDNYDLTAEWYFSSTGSVTLGGFYKKVDGFLAGGTTFQTFNGVRYAIGTTVNTGTGTV
KGFEAAYQQFFDFLPGLLSGLGVQANYTFVDSSVTNPFATAGSNVPTTVPLEKLSKHSYN
LVGLYEKGPVTARLAWSWRGKYFDTTQGSGANGVPQFQKPYASLDASVSYNFNTHLALSV
DAVNLTNRMNLTYIGTLSQPLQYTLNDRRFGFSLRATY
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaagtcacgcacgtctgctgttcggcgcgtcggtcgccgcgttgtcgttccag
gcggccggtatagcgcaggcgcaagccgcgcaggcgaccggcaacgtcaccgccgaccag
gccgcgcaaggaacgcccggcgaccaggacatcgtcgtcaccggcgtgcgcgaatcgctg
cgttcggcgcaggcgatcaagcgcaacgccaatcagatcgtcgattcggtcaacgcgcag
gatatcggcaagctgcccgacgcgaacaccgtcgaggcgctgcagcgtatcaccggcgtg
cagatccagcgtcgctacggcgagggcgcgaccgatttcgaccaccgcaccacgcccgcg
atcaccgtgcgcggcctgacgcaggtcagcaacttcatcgacggccgcgcggcgatctcc
gcctcgggcggccgcacgctcgacctcgaggcgatcccacccgaactgctcgccggtatc
gacgtgttcaagaacccgcccgccagcacgatcgagggcgatgtcgcgggcgtggtcaac
atccgcacccgcctgccgttcgaccagccgggccagctgatcagcgcgaccctgaagggc
aattattatgatcgcgccgacaagttcggtggatcgggctcggcgctgtacagcaaccgc
ttccagaccggcatcggcgagatgggcttcctgctcaacgccagctacgcgcgcagttcg
tatcgccaggacgcgatcctgatcggtgcgttcggcccgattcccgccggcacgaccatc
cccggcgcacccgccaatgcgcaggtgccctatggcgagcagatctacgacgacggcggc
aaccgcaaccgcctgggccttgccggcgcgtggcagtggcaggcggcggacaatctgctc
gtcaccgcgcaggcgctctattcgcggtacaagttctaccgtcagggcaagtacttctac
tacaacaacaacggcaatggtccgacgacgccgctggcgggtgccaacttcaccttcgac
agcgcaggctatgcgacgtccgggtcgctcgccaaccaggtgttcgaatcggcgcggttc
gatcaggacctgaccaacaccaccggcaactatacgctgaacgccaagtgggacgtgtcg
gacaagctgcacgcagtgttcgacgcgcaatatctgaaatcgtcctacaacgccgatcgc
aacggcttcgtcatctcgctctacgaccagacgggccagacgccgtataatgcgaagaac
cagagtatcgtcgatttcgacctgcgcgggtcgcggccggtgtggaacgtccgcaatccc
gcgctgctgtcggatccgaacaattacgccttcacgtacatggcggattcgatcacgcgc
aacgatgccgaccagctcgcgctgaaatacgacctggaatatgacgtcgagggcggcttc
ctgcagaagctgcgcggcggcctgcgctacgcggacagcacgatcgacctgcgcggcacc
tggaacggcttctgtctgctgccctcgggccccaaccccagctgttcgtcgccggcgggg
ctgcccttcgtccggctgtcgcaattccccgaactcgcgctgaagggtccgacgccgaac
ttcttcgatggcaagacgctgcccggcggcatcctctatccgaacttcgaacccggcaat
tcgctgtgggacagcctggtcaagaccgaggcgaagttcggcgcgacgcccaagagcacc
ttctcgcccggcgacctcaaccaccagaccgaacgcacgctcgccacctatgtggcggcg
gattacgaaggcgtgatcggcgggctgaaggtcgacggcaacgccggcgtccgcctggtg
cgcaccagcacggggtcgtcaggcacgatcttcaacagcaacgggacgcaggcaccgatc
gacgtccagcgccgctacgtcaaggcgctgcccagcttcaacgtgcgcgcgcacatcacc
gacacgttccagacgcgcttcgccttctcgaaatcgttcgcgcggccgaacttcgaccag
atggcgaccaacgtctcgctcaacaatccgaccgatcgcagcttcatccgccgcgatgcc
aacggcaatatcatcgaacaattaccgaccggcggatcgggcaatccctatctgcgtccg
atcacgtcggacaattacgatctgaccgcggaatggtatttctcatcgaccgggtcggtg
acgctgggcggcttctacaagaaggtcgacggtttcctcgcgggcggcacgacgttccag
acgttcaacggcgtccgctatgcgatcggcacgacggtcaataccggcaccggcacggtc
aaggggttcgaggcggcgtaccagcagttctttgacttcctgccgggtctgctcagcggg
ctgggcgtgcaggcgaactacaccttcgtcgacagcagcgtgaccaatccgttcgcgacg
gcggggtcgaacgtgccgacgacggtaccgctcgagaaactgtcgaagcacagctacaac
ctcgtcggcctgtacgaaaaggggccggtgacggcgcgtctcgcctggagctggcgcggc
aagtatttcgacacgacgcagggcagcggcgcgaacggcgtgccgcagttccagaagccc
tatgcctcgctcgacgcctcggtcagctacaatttcaacacgcatctggccttgtcggtc
gatgcggtgaacctgaccaaccgcatgaacctgacgtacatcgggacgctcagccagccg
ttgcaatatacgctcaacgaccggcgcttcggcttctcgctgcgcgcgacctattga
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