Sphingomonas sp. FARSPH: DM480_00810
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Entry
DM480_00810 CDS
T05685
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf03030
DNA replication
sphf03430
Mismatch repair
sphf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM480_00810
03430 Mismatch repair
DM480_00810
03440 Homologous recombination
DM480_00810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphf03032
]
DM480_00810
03400 DNA repair and recombination proteins [BR:
sphf03400
]
DM480_00810
Enzymes [BR:
sphf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM480_00810
DNA replication proteins [BR:
sphf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM480_00810
DNA repair and recombination proteins [BR:
sphf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM480_00810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_5
AAA_22
RuvB_N
AAA_30
AAA_19
Adeno_E1B_55K_N
AAA_16
AAA_24
AAA_14
AAA_assoc_2
DUF815
Glyco_tranf_2_5
AAA_18
DUF218
DUF2586
Motif
Other DBs
NCBI-ProteinID:
AXJ94250
UniProt:
A0A345WKP8
LinkDB
All DBs
Position
complement(157718..159385)
Genome browser
AA seq
555 aa
AA seq
DB search
MSDSFDLGAPPQPASQPNAYRVLARKYRPQTFRELIGQDAMVTTLGNAITRGRLAHAFLM
TGVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGRCEPCRAIAEGRHIDVIEMDAASH
TGVDDVREIIDAARYAAVSARYKIYIVDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTE
VNKVPITVLSRCQRFDLRRISAEQLAEHFAFVCREEGVAAEPEALMLIARAAEGSARDGL
SILDQAIAHAGLEGGAVGADAVRQMLGLSDRGAVRDLLALVLAGDGQGALAALRRQYDYG
VDPVSVLRSLLEMVHAITLTKVGTPDDPSQPAEERAARLDWAQQLSFPALHRLWQLFLKG
HDEVAKAALPIEAAEMALLRAIHASTLPDPGELARQIASGKIAAPPAAASTGSPAAPPAS
VTATAAVEEAGPAIPASFAAMVDALDDAGQLALAARLRHGARLVRYAPLEIVFSGSRPMA
ADTLAELAAALKALTQKVWKVTLDDVPGEPTLTEAEEMKEESARQAAWAHPMLQAARAAF
PDAELEDFPGKRRLA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccttcgacctcggcgcgccgccgcaacccgcgagccagccgaacgcctat
cgcgtgctcgcgcgcaaataccggccgcagacgttccgcgaactgatcggtcaggacgcg
atggtcaccacgctcggcaatgccatcacgcgcgggcggctggcgcacgcctttctgatg
acgggcgtgcggggtgtcggcaagacgtcgaccgcgcgcctgatcgcaaaggccttgaac
tgcatcggccccgacgggcagggtggcccgacgatcgatccgtgcgggcgatgcgagccg
tgccgcgcgatcgcggaggggcgccacatcgacgtgatcgagatggacgctgccagccac
accggcgtcgacgacgtgcgcgagatcatcgacgcggcgcgctatgccgccgtctccgca
cgctacaagatctacatcgtggacgaggtccacatgctctccaagaacgccttcaacgcg
ctgttgaagacgctggaggagccgcccgcccatgtgaagttcctgttcgccacgaccgag
gtgaacaaggtgccgatcaccgtcctgtcgcgctgccaacggttcgacctgcgccggatt
tccgccgagcaactcgccgagcatttcgccttcgtctgccgcgaggaaggcgtcgcggca
gagccggaggcgctgatgctgatcgcgcgcgcggcggaagggtcggcgcgcgacggcctg
tcgatcctcgatcaggcgatcgcgcatgccgggctggagggcggcgcggtcggcgcggat
gcggtgcgccagatgctcggcctgtctgatcggggtgcggtgcgcgatttgctggcgttg
gtgctggccggcgacgggcagggcgcgctcgccgccctgcgccgccaatatgattacggc
gtcgatcccgtgtccgtgctgcggtcgttgctggaaatggtccatgcaatcacgctgacc
aaggtcggcacgccggacgatccgtcgcagcccgcggaggaacgcgcggcgcgcctcgac
tgggcgcagcaattgtccttccccgcgctccaccgcttgtggcagctgttcctgaagggg
catgacgaggtcgccaaagcggcgctgccgatcgaggcggcggagatggcgctgctccgc
gcgatccatgcgtcgacgctgcccgatccgggcgagcttgcgcgccagatcgccagcggc
aaaatcgccgcgccgcccgccgcagcctctacggggtcgcccgccgcgccgcccgcgtcc
gtcaccgcgaccgcggcagtggaggaagcggggccggcgattccggcgagtttcgccgcg
atggtcgatgcgctggacgatgccggacagctcgcgctcgccgcgcggctgcggcacggc
gcgcggctcgtccgctacgccccgctcgagatcgtgttcagcggcagtcgcccgatggct
gccgatacgctcgccgaactcgccgccgcgctcaaggcgttgacgcagaaggtgtggaag
gtgacgctggacgacgtgccgggcgaaccgacgctgaccgaggcggaggaaatgaaggag
gaaagcgcgcggcaggccgcctgggcgcacccgatgctccaggccgcgcgcgccgccttc
cccgatgccgaacttgaagatttccccggaaaacggaggcttgcatga
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