Sphingomonas sp. FARSPH: DM480_01430
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Entry
DM480_01430 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_01430
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_01430
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AXJ94350
LinkDB
All DBs
Position
284644..287595
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AA seq
983 aa
AA seq
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MTKCRLLAATACILLPALPATAQTTDPAQEAPAAQGAAPADASLGDIIVTAQRQSQRLQD
VPIAVSAFTADALQKQQIVNPTALQQTLPSVTFTKTGFTTSSFTIRGIGDLCVGTSCDTA
TGIHINDMPLTTTRLFETEFFDLQRIEVLRGPQGTLFGRNATSGVVNFITAKPDLTGIHA
AGEFEYGNYDSKRVQGMFNLPFSDTLGIRVAGTYLKRDGYTLNTYDNQRIDDRDLYAVRG
TLSWAPSSDTRIDLIGYYFHERDNRSRIQKQLCHRDPTGVLGCLPDTKGFETTNGLSTLA
AVLTSSEFFTLNNPVLGRFALQSLYGTDPYAGVVNPTDVRTVRVDYTPTYFAEEEQYTAK
IFHDFGRVNFNFTGGYARNTVDSTVDYNLAVEGSLASNPGLAALNALGRAGSPFAFLNGV
RQTLIPNGPAGGVCQSAADPNNLGVYGGASIGCYPQSLDFDRSRITSRQISAEAHIDSSF
DGPFNFLLGGIYLDNRSRNNDYFVNAFGLDYASGILGAASSAATPGVAGNTFLASPFYRN
DTPYFRLKSWGVFGETYFAVSDRAKLTLGLRYNHDDKYVQARNLTLNVLTPYNATSITGG
LNYATTDFDPTTAGVQDYAVRQVAFGRLTGRAVFDFKVTPDNLLYASYSRGYKSGGINPP
LPATFTVPQAFAPEQVDAFEIGSKNSFGQGALRLNVTGFYYKYKGLQLSRIVARTAVNDN
VDANIYGLEAEAIVSPTPRLVVNLTMSALKTEITGDKQLINPRLPSGGRTDTVIIKDITN
ASNCVVIPNAGGAAAANGYVAAVNSAIGLRAPTAIPGTGTTGAFGVCSALMASAANPSAP
LRALFGVPTGALPFTVTDGVGVTLSGNKLPQAPTYKFAVGAQYTIPFANGWSVVPRADLN
YTGNFYASVFNMNIDRVPGYEVVNAQVQVNAPGDRFYLRGFVQNLANDNAITGQGVGDQS
SGLYTNIFTIEPRRYGLAAGFRF
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaatgccgcctgcttgccgcgaccgcctgtatcctgctaccggcgctgcccgcc
actgcacagaccaccgaccccgcacaggaagcgccagccgcgcaaggcgctgcgcccgcc
gacgccagcctcggcgacatcatcgtcaccgcgcagcgtcagtcgcagcgtttgcaggac
gtgccgatcgcggtcagcgccttcaccgccgacgcgctgcaaaagcagcagatcgtcaac
ccgaccgcgctgcaacagaccttgccctcggtcaccttcaccaagaccggcttcaccacg
tccagcttcacgatccgcggcatcggcgacctgtgcgtcggcacgtcgtgcgacactgcg
accggcatccacatcaacgacatgccgctgacgacgacgcggctgttcgagacggaattc
ttcgaccttcagcggatcgaggtgctgcgcgggccgcagggcacgctgttcggccgcaac
gcgacgtcgggcgtggtgaacttcatcaccgccaagcccgatctcaccggcatccacgcc
gcaggggagttcgaatacggcaattacgattcgaaacgggtgcagggcatgttcaacctg
ccgttcagcgacacattggggatccgggtcgccggcacctatctgaagcgcgacggctac
acgctcaacacctatgacaaccagcggatcgacgaccgcgacctctatgcggtgcgcggc
actttgtcctgggcgccgtccagcgacacgcgcatcgacctgatcggctattatttccac
gaacgcgacaaccgcagccgcatccagaagcaattgtgccaccgcgatccgaccggcgtg
ctcggctgcctgcccgacacgaaggggttcgagacgaccaacggcctctcgacgctcgcc
gcggtgctgacctcgagcgaattcttcacgctcaacaatcccgtgctcggccgcttcgcg
ctacagagcctttacggcaccgatccctatgccggggtcgtcaaccctaccgacgtgcgc
accgtccgcgtcgactataccccgacctatttcgccgaagaggagcaatataccgccaag
atctttcatgatttcggccgcgtgaacttcaactttaccggtggctacgcgcgcaacacc
gtcgacagcacggtcgactacaatctcgctgtcgaagggtcgctcgccagcaacccgggc
cttgccgcgctcaacgcgctgggccgcgcgggcagtccgttcgccttcctcaacggcgtg
cgccagacgctgatccccaacggtccggcgggcggcgtctgccagtcggcggccgacccc
aacaatctgggcgtctacggcggggcgagcatcggctgttatccgcagagcctcgatttc
gaccgctcgcgcatcaccagccgccagatttccgccgaagcgcatatcgacagcagcttc
gatggccccttcaatttcctcctcggcggaatttatctcgataaccgcagcagaaacaac
gattatttcgtcaacgcctttggcctcgactatgcctccggcatccttggcgccgcctcg
tccgcggcgacacccggcgtcgcgggcaatacgtttctcgcatcgcccttctaccgcaac
gacaccccctatttccggctgaagtcctggggcgtgttcggcgaaacctatttcgcggtg
agcgatcgcgccaagctgacactcggcctgcgctacaatcacgacgacaaatacgtgcag
gcgcgcaatctgacgctcaacgtgctgacgccgtacaacgcgaccagcatcaccggcggc
ctcaattatgcgacgactgatttcgacccgaccaccgcgggcgtgcaggattatgcggtt
cgccaggtcgcattcgggcggctgaccggacgcgcggtgttcgacttcaaggtcacgccc
gacaatctgctctacgcctcttattcgcgcggctacaaatcgggcggcatcaacccaccg
ctgcctgcgaccttcaccgtgccgcaagcgttcgcgcccgaacaggtcgacgcattcgaa
atcgggtcgaagaacagcttcggccaaggcgcgttgcgcctaaacgtcacgggtttctac
tacaagtacaaggggttgcagctcagccgcatcgtcgcgcgcaccgccgtcaacgacaat
gtcgatgccaatatctacggcctggaggcggaggcgatcgtcagccccaccccgcgcttg
gtcgtcaacctgaccatgagcgcgctgaagaccgagattaccggcgacaaacagctgatc
aacccgcgcctgccgtcgggcggccgcaccgacacggtgatcataaaggacatcaccaac
gcgtcgaactgcgtcgtcattcccaacgcgggcggcgcggcggcggcaaacggctatgtc
gccgcggtcaacagcgcgatcggcctgcgcgcgccaaccgcgatcccgggcaccggcacg
accggcgcgttcggtgtctgctcggcgctcatggcatccgcggccaatccctcggcaccg
ctgcgcgccctgttcggcgtaccgaccggcgcactgcccttcaccgtcaccgacggcgtc
ggcgtcacgctcagcggcaacaagctcccgcaggcgcctacctacaaattcgcggtcggc
gcgcaatatacgatcccctttgccaacggctggtcggtcgtgccgcgtgcggacctgaat
tacaccggcaatttctatgcgagcgtgttcaacatgaacatcgatcgtgttcccggctac
gaggtcgtcaacgcgcaggtccaggtcaatgcgcccggcgaccgtttctacctgcgcggg
ttcgtccagaatctggcgaacgataacgcgatcaccggacagggggtcggcgaccagtcg
tcggggctgtacaccaacatcttcacgatcgaaccgcgccgttacggcctcgccgccggc
ttcaggttctga
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