Sphingomonas sp. FARSPH: DM480_02185
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Entry
DM480_02185 CDS
T05685
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
DM480_02185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_YknX
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
BSH_CusB
Beta-barrel_AprE
CzcB_C
YknX_C
RND-MFP_C
DUF4407
HH_EMRA
Biotin_lipoyl
DUF8044
Motif
Other DBs
NCBI-ProteinID:
AXJ96796
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Position
complement(436159..437550)
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AA seq
463 aa
AA seq
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MQTTDEFLGVKPVPAWRRYLKWVLIVVGVILLGLLVSRCFGGKKGADYATQTVDRGDLTV
SVSATGKLAPTTQVVVGSQLSGLVTKVVVDVNDRVAVGQPLALIDPQQIDDQIKQQQAQI
AANVAQVNQAQATVAESRAQLSRLEEVYKLSGGRVPSGTELQTGRADYQRAVAALKTAQA
NVSASRALLAQSQTQRQRAIIRSPVNGVVLARQVDPGQTVAASFNTPTLFVIAEDLSKMK
LEVAIDEADVGGVKVGQKASFTVDAFPGKTFPAQITRVDLGSNLTVSAASTSSSSTTSAT
STSNQVVSYAADLTVANPTLQLRPGMTATADIITSEKKNVLLVPNAALRFKPASGASSDG
DGIAGSLTMRRMRRGNQRQATVGYGATQTVYVKGADGQPQPVQVTTGATNGQMTEVLSGD
LKPGAQVITGQLASGDSGSGSGGSSRRRSGGAGGGAGGGQRGQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaccgacgaattcctgggcgtgaagcccgtgccggcgtggcgccgctacctg
aaatgggtgctgatcgtcgtcggcgtcattttgctcggcctgctcgtcagccgctgcttc
ggcggcaagaagggcgccgattatgcgacgcagacggtcgaccgcggcgatctgacggtc
agcgtctcggcgacgggcaagctcgcgccgacgacgcaggtcgtcgtcggctcgcaattg
tcgggtctcgttaccaaggtcgtcgtcgacgtcaacgaccgcgtcgccgtcggccagccg
ctcgccttgatcgacccgcagcagatcgacgaccagatcaagcagcagcaggcgcagatc
gccgccaacgtcgcgcaggtgaaccaggcgcaggccaccgtcgccgaaagccgcgcgcag
ctgtcgcggctggaagaggtgtacaaattgtcgggcggccgcgtgccgtcgggcaccgaa
ttgcagaccggccgcgcggattaccagcgtgccgtggcggcactgaagacggcgcaggcg
aacgtctccgcctcgcgcgcgttgctcgcgcaaagccagacgcagcggcagcgcgcgatc
atccgttcccccgtcaacggcgtcgtgctggcacgccaggtcgatcccggccagacggtg
gcggcctcgttcaacacgccgactttgttcgtcatcgccgaagacctgtcgaagatgaag
ctggaggtcgcgatcgacgaggcggacgtcggcggcgtcaaggtcgggcagaaggcgagc
ttcaccgtcgatgcctttcccggcaagaccttccctgcgcagatcacgcgcgtcgacctc
ggctccaacctgaccgtgagcgcggcgagcacctcgtcgtcctcgacgaccagcgcgacg
tcgaccagcaaccaggtcgtctcctatgccgccgacctcaccgtcgccaacccgacgctg
caactgcgtcccggcatgaccgcgaccgccgacatcatcacgtcggaaaagaagaacgtg
ctgctcgtccccaacgccgcgctgcgcttcaaaccggcgagcggcgcgtcgtcggacggc
gacggcatcgcggggtcgctgacgatgcggcggatgcggcgcggcaaccagcggcaggcg
accgtcggctacggcgcgacgcagaccgtctacgtcaagggtgcggacggtcagccgcag
ccggtgcaggtgacgaccggcgcgaccaacgggcagatgaccgaggtgctgagcggtgac
ctgaagcccggcgcgcaggtcatcaccggccagctggcgagcggcgatagcggcagcggc
agcggcgggtcgagccggcggcgcagcggtggtgcgggtggcggcgcaggcggtggccag
cgtggccagtaa
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