Sphingomonas sp. FARSPH: DM480_02610
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Entry
DM480_02610 CDS
T05685
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphf03016
]
DM480_02610 (truB)
Enzymes [BR:
sphf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DM480_02610 (truB)
Transfer RNA biogenesis [BR:
sphf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DM480_02610 (truB)
Prokaryotic type
DM480_02610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AXJ94546
UniProt:
A0A345WLJ4
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All DBs
Position
521515..522396
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AA seq
293 aa
AA seq
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MHGWIILDKPLGLGSTQAVSAVKRALRQGGYGKAKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDSDKAYAFTIRFGEQTDTLDAEGSVVATSPVRPTMAQIDGVLPRFTGPISQVPPA
YSALKVDGTRAYDLARAGEEVVLKSRDVTVHALHVAADGAGEVTLEAHVSKGTYIRSLAR
DIALALGSVGHVTMLRRLKAGPFDLAHAISLDKLSQAGMARELEQILLPLRAGLDDIPAL
SLSPDQAGALRQGRVLIGIAADDGPYFACEGDTPVALVSVEGHEARVVRGFNL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcacggatggatcattctcgacaagccgctcggactcggctcgacgcaggcggtgtcc
gcggtcaagcgcgcgctgcgacagggcggctacggcaaggcgaaggtcggccatggcggc
acgctcgacccgctggcgacgggcgtgctgccgatcgcggtcggcgaggcgacgaagctt
gccgggcgcatgctcgacagcgacaaggcgtatgcctttacgatccggttcggcgaacag
accgacacgctggatgccgaagggtcggtggtcgcgacctcgccggtgcgcccgacgatg
gcgcagatcgacggcgtgctgccgcgcttcaccggcccgatatcgcaggtgccccctgcc
tattccgcgctgaaggtggatgggacccgcgcctacgacctggcgcgggcaggcgaagag
gtggtgctgaagagccgcgacgtcacggtccacgcgcttcacgtcgcggctgacggcgct
ggagaggtaacgctggaggcccatgtctccaaggggacgtacatccgctccctcgcccgc
gacatcgcgctggcactcggcagcgtcggccacgtcacgatgctgcgccggctgaaggcg
gggcccttcgaccttgcccatgcgatatcgctggacaaattgagccaagccggtatggcg
cgcgagcttgaacagatactcctgccgctgagggcggggctggacgacatcccggctctg
tccctctcccccgatcaggcaggggcgctccgccagggacgcgttctgatcgggatcgcc
gcagacgatggcccgtatttcgcgtgcgagggggacaccccggtcgcgctggtatcggtc
gagggccacgaggctcgcgtcgtccgcggtttcaacctgtga
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