KEGG   Sphingomonas sp. FARSPH: DM480_04060
Entry
DM480_04060       CDS       T05685                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sphf  Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:sphf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphf03032]
    DM480_04060 (parE)
   03036 Chromosome and associated proteins [BR:sphf03036]
    DM480_04060 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sphf02048]
    DM480_04060 (parE)
Enzymes [BR:sphf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DM480_04060 (parE)
DNA replication proteins [BR:sphf03032]
 Prokaryotic type
  DNA Topoisomerases
   DM480_04060 (parE)
Chromosome and associated proteins [BR:sphf03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    DM480_04060 (parE)
Prokaryotic defense system [BR:sphf02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    DM480_04060 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AXJ96835
UniProt: A0A345WT33
LinkDB
Position
complement(809837..811819)
AA seq 660 aa
MSDDLFASTGAPAASYDASSIEVLEGLEPVRRRPGMYVGGTDERALHHLAAEVLDNAMDE
AVAGHATRIEVTLEPGNRLTIVDNGRGIPVDPHPKFPDKSALEVILSTLHSGGKFAGKAY
ATSGGLHGVGVSVVNALSSDTLVEVARDRQLYRQRFSRGQTLGPLEHVGAAPNRRGTSVA
FTPDVEIFGPELGFKPKRLYQLARSKAYLFAGVEIRWKCAASLVESTDTPAEAVFQFPGG
LADHLKEQIGGRECATADFFAGRQDFPNEQGRVEWAVAWPLWSDGSYSWYCNTIPTPDGG
THEQGLRQALVRGLRAFGELVNQKKAKDITADDVMVGSELMLSVFIRDPQFQSQTKDRLT
SPEAAGLVEKAVRDHFDHWLGHNMERGKALLGYVLDRMDERLRRKAEREVKRKTATSARK
LRLPGKLTDCAADSPEGTELFIVEGDSAGGSAKQARDRKTQAILPIRGKILNVASATSAK
ILANQEIADLIQALGCGTRKDCVPDNLRYERIVIMTDADVDGAHIATLLMTFFFQEMPDL
VRRGHLYLAQPPLYRLTVGAKSLYARDDAHRAELERTAFKGKKVEVARFKGLGEMNPIQL
RETTMDPKTRGMIRITLPQEYEERAGVKDLVDRLMGNNPAHRFAFIQENAARLDEEAIDA
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgagcgatgacctgttcgcgtcgacgggcgcacccgcggcaagctacgacgcctcttcg
attgaggtgctggaggggctggagccggtccgccggcgcccgggtatgtacgtcggcggc
accgatgagcgcgcgctccatcaccttgccgccgaggtgctcgacaatgcgatggacgag
gcggtcgcgggccatgcgacgcggatcgaggtgacgctggagccgggcaaccgcctgacc
atcgtggacaacggccgcggcatcccggtcgatccgcaccccaagtttcccgataagtcg
gcgctggaggtgatcctgtcgacgctccattccggcggcaagttcgccggcaaggcctat
gcgaccagcggcggcctgcacggcgtcggcgtgtccgtcgtcaatgcattgtcgagcgac
acattggtcgaggtcgcgcgcgaccgacaactgtatcgccagcgcttcagccgcggccag
acgctggggcctctggagcatgtcggcgcggcgcccaaccggcgcggcacctcggtcgcc
ttcacccccgacgtcgagattttcgggcctgagctcggcttcaagcccaagcggctgtat
cagctcgcgcggtcgaaggcgtatctgttcgccggggtcgaaatccgctggaagtgcgcc
gcctcgctggtcgagagcacggatacgccggcagaggcggtgttccagttccccggcggc
cttgccgaccacctcaaggaacagatcggtggccgcgaatgcgccaccgcggatttcttc
gccgggcgacaggatttcccgaacgaacagggccgcgtcgaatgggcggtcgcctggccg
ctgtggagcgacggcagctacagctggtattgcaacacgatcccgacccccgacggcggc
acccacgaacagggactgcgccaggctttggtgcgcggcctgcgcgcgttcggcgagctg
gtaaaccagaaaaaggcgaaggacatcaccgcggacgacgtgatggtcggcagcgagctg
atgctcagcgtcttcatccgcgatccgcaatttcagagtcagaccaaggaccgtctgacc
agcccggaggcggcgggcctcgtcgaaaaggcggtgcgcgaccatttcgatcattggctc
ggccacaatatggagcgcggcaaggccctgctcggctatgtgcttgaccggatggacgag
cggctgcggcgcaaggcggagcgcgaggtcaagcgcaagaccgcgacgagtgcgcgcaag
ctgcgcctgcccggcaagctgaccgactgtgccgccgactcgccggagggcacggagctg
ttcatcgtcgaaggcgattcggccggcggttcggcgaaacaggcgcgcgacaggaagacg
caggcgatcctgccgatccgcggcaagatcctgaacgtcgcatccgcgacgagcgcaaag
atcctggctaatcaagagatcgccgacctgatccaggcgctcggctgcggcacgcgcaag
gactgcgtgcccgacaatctgcgctacgagcggatcgtcatcatgaccgacgccgacgtc
gacggcgcgcatatcgcgacgctgctgatgacgttcttcttccaggagatgcccgatctg
gtgcggcgcgggcacctctatctcgcgcagccgccgctctatcggctgacggtgggcgcg
aaatcgctctacgcgcgcgacgacgcgcaccgcgccgagctggaacgcaccgcgttcaag
ggcaagaaggtcgaggtcgcgcgcttcaaggggctgggcgaaatgaatccgatccagctg
cgcgagacgacgatggacccgaagacgcgcggcatgatccgcatcacgctgccgcaggaa
tatgaggagcgcgccggcgtaaaggacctggtcgaccgcctgatgggcaacaaccccgcc
caccgcttcgccttcatccaggaaaatgcggcgcggctggacgaagaggcgatcgacgcg
tga

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