Sphingomonas sp. FARSPH: DM480_04190
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Entry
DM480_04190 CDS
T05685
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM480_04190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphf03400
]
DM480_04190
Enzymes [BR:
sphf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
DM480_04190
DNA repair and recombination proteins [BR:
sphf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM480_04190
Prokaryotic type
DM480_04190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AXJ94820
LinkDB
All DBs
Position
complement(842367..843443)
Genome browser
AA seq
358 aa
AA seq
DB search
MDATRTCLPDAPIDAGSIAPALLDWYDRHRRDLPWRARAGEAADPYRVWLSEVMLQQTTV
AAVTPRFLAWTARWPDFASLAAADEADVMAAWAGLGYYARARNLVKAARAVVADHGGVFP
RTEAVLRTLPGLGAYTAAAVAAIAFGERAVVVDANVERVVARLFAIATPLPVARPAIRAA
ADTITPDARAGDFAQGMMDLGSSICTVRAPKCLLCPLQPHCRAHAQGLAEALPAKAAKKA
KPQRQGTIFWLERDGRVLLVRRPDTGLLGGMRALPTGPWQEGAPPGLADAPAAAAWQLRN
ATVAHGFTHFDLQLALAVARADAHHRPESEWWPIADLDAAGLPTVFAKAARAIMRRED
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtggacgctacacgcacttgcctgcccgacgcgccgatcgatgcgggatcgatcgccccc
gcgctgctcgactggtacgaccgccatcgtcgcgacctgccgtggcgggcacgggcgggg
gaggcggcggacccgtatcgcgtctggctgtcggaggtgatgctgcagcagacgacggtc
gccgcggtgaccccgcgcttcctcgcctggaccgcgcgctggcccgatttcgccagcctc
gccgccgcggacgaggcggacgtgatggccgcctgggcggggcttggctattatgcccgc
gcgcgcaatctggtgaaggcggcgcgcgccgtcgtcgcggaccatggcggcgtctttccg
cgcaccgaggcggtgctgcgcaccttgcccggtctcggtgcctataccgccgcggcggtg
gcggcgatcgcgttcggcgaacgcgcggtggtggtcgacgccaatgtcgaacgcgtcgtc
gcgcggctgttcgcgattgccacgccgctccccgtcgcgcggcccgcgatccgggcggcg
gcggacacgatcacccccgacgcacgcgcaggcgatttcgcgcaaggcatgatggacctg
ggctcgtcgatctgcacggtgcgcgcgcccaaatgcctgctctgcccgctccagccgcac
tgccgcgcgcatgcgcaggggctggcggaggcgctgcccgccaaggccgcgaaaaaggcg
aagccgcagcgtcaaggcacgatcttctggctcgaacgcgacggccgcgtcctcctcgtc
cgccgtcccgacacggggctgctcggcgggatgcgcgcgctgccgaccgggccgtggcag
gagggtgcgccccccggcctcgccgacgcgcccgccgcagcggcgtggcagctgcgcaac
gcgacggtcgcgcacggcttcacccatttcgacctgcaactcgcgcttgccgtcgcgcgc
gccgacgcgcatcaccggcctgagagcgaatggtggccgatcgccgatctcgatgcggcg
gggctgccgaccgtcttcgccaaggcggcgagagcgatcatgaggagggaagactga
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