Sphingomonas sp. FARSPH: DM480_04250
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Entry
DM480_04250 CDS
T05685
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf00260
Glycine, serine and threonine metabolism
sphf00460
Cyanoamino acid metabolism
sphf00630
Glyoxylate and dicarboxylate metabolism
sphf00670
One carbon pool by folate
sphf00680
Methane metabolism
sphf01100
Metabolic pathways
sphf01110
Biosynthesis of secondary metabolites
sphf01120
Microbial metabolism in diverse environments
sphf01200
Carbon metabolism
sphf01230
Biosynthesis of amino acids
sphf01240
Biosynthesis of cofactors
sphf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DM480_04250 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DM480_04250 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DM480_04250 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DM480_04250 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DM480_04250 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DM480_04250 (glyA)
Enzymes [BR:
sphf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DM480_04250 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AXJ94832
UniProt:
A0A345WMD0
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Position
complement(855785..857095)
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AA seq
436 aa
AA seq
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MSTQPTPANDVRADGFFTRGLADADPAVFAGIAHELTREQTQIELIASENIVSKAVLEAQ
GSVFTNKYAEGYPGKRYYQGCAPSDEVETLAIERAKQIFGCGFANVQPHSGAQANGAVML
ALVKPGETILGMSLDAGGHLTHGAKAAMSGKWFNAVQYGVDPDTHLIDYDQVEALALEHN
PKLIIAGGSAYPRVIDFARFRSIADKVGAYFMVDMAHFAGIVAAGLHPTPFGHAHVVTTT
THKTLRGPRGGMIMTDDEGLAKKINSAVFPGLQGGPLMHVVAAKAVAFGEALRPDFKTYI
AAVVENAKVLAATLKERGADVIAGGTDTHLALIDLRPLGVTGKDADEALERAGITCNKNG
IPNDPLPPMKTSGIRVGSPAGTTRGFGPAEFREIGHMVADVLDGLRTKGEAGDPDVEANV
RSRVRALCARFPIYEG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcagcccacccccgccaatgacgtccgcgccgacggtttcttcacccgcggt
ctcgccgacgccgatcccgccgtcttcgccggcatcgcgcacgaactgacccgcgaacag
acgcagatcgagctgatcgccagcgagaacatcgtctcgaaggcggtgctcgaggcgcag
ggttcggtgttcaccaacaaatatgccgaaggctatccgggcaagcgctattaccagggt
tgcgcgccctcggacgaggtcgagacgctggcgatcgagcgcgccaagcagattttcggc
tgcggcttcgccaacgtccaaccgcattcgggcgcgcaggcgaacggcgcggtgatgctg
gcgctggtcaagccgggcgagacgatcctgggcatgagcctggatgccggcggccacctg
acgcacggcgcgaaagcggcgatgagcggcaagtggttcaacgcggtgcaatatggcgtc
gaccccgacacgcatctgatcgactatgatcaggtcgaggcgctcgccctcgagcataac
ccgaagctgatcatcgccggcggcagcgcctacccccgcgtcatcgacttcgcccgcttc
cgcagcatcgcggacaaggtcggcgcatatttcatggtcgacatggcgcatttcgccggc
atcgtcgccgccggcctgcacccgacgccgttcggccatgcgcacgtcgtcaccacgacg
acgcacaagacgctgcggggaccgcgcggcggcatgatcatgaccgacgacgagggactt
gccaagaagatcaactcggcggtcttcccggggctgcagggcggcccgctgatgcacgtc
gtcgccgccaaggcggtggcgttcggcgaggcgctgcgtcccgacttcaagacgtacatc
gccgcggtggtcgagaacgccaaggtgctcgccgcgacgctcaaggagcgcggcgccgac
gtgatcgcgggcggcaccgacacgcacctcgcgctcatcgacctccggccgctcggcgtc
accggcaaggacgcggacgaggcgctggagcgggcgggcatcacctgcaacaagaacggc
atccccaacgacccgctgccgccgatgaagaccagcggcatccgcgtcggttcgcccgcc
ggcacgacgcgcggcttcggcccggccgaattccgcgagatcggccatatggtcgccgac
gtgctcgacggcctgcgtacgaagggcgaggcgggggaccccgacgtcgaggcgaacgtt
cgtagccgcgtgcgcgcgctctgcgcacgcttccccatctacgaaggataa
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