Sphingomonas sp. FARSPH: DM480_04335
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Entry
DM480_04335 CDS
T05685
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DM480_04335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphf03400
]
DM480_04335
DNA repair and recombination proteins [BR:
sphf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DM480_04335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AXJ94846
UniProt:
A0A345WME4
LinkDB
All DBs
Position
872428..873186
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AA seq
252 aa
AA seq
DB search
MRAPRQIIRVIDLETTGSAPPAHGVCEIGWQDVALQPSGRWELEGEGGSILVNPGRAIPP
ITQAIHHILDEDVADAPWWHDVARRVLDPYPRRVALAAHRADFEQQFCTPNLTHGADWIC
TWKCALRLWPDSPSFSNQVLRYWRRPEGLDQSRGLPVHRAFPDAYVTAHHLRDQLNEASL
AQLLEWSRDPGLLPRVRYGPHRGKEWRELDHESLMGFLTDRDPDIRFTANAEMDRRSGGG
RVGRASAQDLLL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctccccgccagatcatccgcgtcatcgatctcgaaaccaccggcagcgcgccg
cccgcgcatggcgtgtgcgagatcgggtggcaggatgtcgcgctccagccgtcgggccgc
tgggaactggagggcgagggcgggtcgatcctcgtcaatcccggccgcgcgatcccgccg
atcacgcaggcgatccaccatatcctcgacgaggatgtcgccgacgcgccatggtggcac
gacgtcgcgcgccgcgtgctagatccctatccgcgccgcgtcgcgctggcggcgcatcgc
gcggatttcgaacagcaattctgcacccccaatctgacgcacggcgccgactggatctgc
acctggaaatgcgcgctgcgcctgtggcccgattcgcccagcttttccaaccaggtgcta
cgttactggcgccggcccgaggggctggaccagagccgcggcctgcccgtgcaccgcgcc
tttcccgacgcctatgtcaccgcgcatcacctgcgcgaccagctcaacgaggcgagcctc
gcgcaattgctcgaatggtcgcgcgaccccggcctgctgccgcgcgtccgctatggcccg
catcgcggcaaggaatggcgcgagctggaccacgaaagcctgatgggcttcctgaccgat
cgcgaccccgacatccgcttcaccgccaatgccgagatggaccggcgcagcggcggcggc
cgcgtcggccgcgccagcgcgcaggatctgttgctgtaa
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