Sphingomonas sp. FARSPH: DM480_04725
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Entry
DM480_04725 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_04725
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_04725
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AXJ94909
LinkDB
All DBs
Position
complement(959920..963240)
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AA seq
1106 aa
AA seq
DB search
MSQMRRCETREILRCKVGASLIRQLSGVAGRRLPERSAEQQNRRPCSDVIPAYLLGGKTM
KKSVLLGACSIIAIFAIAPAAAAAQQAQTTAPPPGQTQTPNEKESLEGGVPVPANSDAAE
EAEARKNVERQDAKAAGAGDPDARAAESELRRYQDKVVTKTKGSDDIQVTGSRLRDGDKT
SRLIVIDAKEIRDRGVTSVEELVRTLPQNVATIGAITNSRGKGPLNSNVGVTGSNIVSDV
GTVGLAAANLGGVGAGNTLVLVNGRRIAGAAGVEQGYANLNGIPLSAIERVEISTGGQSA
IYGADAMGGVINFILKKNYVGTTIGASHRETSAGSKDTRISLYTGRAWGSGSIAGTLEFG
RIDPIVNAKTGYVTNNYAPLFNNNPAYDKRSLSAGTQPGTTLLPGVYNPATGQFVQSGLT
VPSGFTGAPKQSDLIPATLSTSRDYVPTYAGPRTRTISGTLNFEQKITDRLSVYATGLYT
RSRNTQANNVFGGLAVGLAPGQYYNPFPAFALGSSAYASTVYYYPGSEIADGSLVPTNVR
NTVTAWTANAGVSYDFGKTAKVQLNYTRSRTSTEGSGTQLGSLVSFQRTVTNGVVSYPCY
NFLLANNRVPANRRAAVQAAFQAQCAALTSNDPNVAFNPWRSNAAGGGANINTFLYPYVV
DDLGNALSNVEGRVTGEVAVLPAGAISYAVGAEYSKTTLKNSFVSDIAGPDPSTDRYAFF
GEVNLPILGKDYTLPMAKRLLFNIAMRRDVNSSVGAIGTVNRVPVDQGGEIIYGKNRFGR
TTPSWGMLWSPTNTIDIRAKFTRGFKAPPPTQLYSVQGTTQTLTSIVGDPLYTCTVQCGR
PQNGLPTYSVPLLTVPNPNLRPETSRQQIYSIGWQPTGALSGLSLAVSYNRNRIRNQFAT
VRELYYYLPAIEVLKLPLFFPRDPVTNRILSQNNVRYNIVGSDYESLTYEASYLFVTNFG
TFQPKITYLDNIVAKTIGLTENQVLDQRGRILGVDKYKVVGSLQWNWDKVSTNLYVYHTP
SYLNDYMSMYAAGVQLNPELITRVKPLTTVDLSVSWIVTNHLNVQFAGRNIFKAAAPFTV
VDSLPYDTSRYNIEGRSLMLSTRLSF
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagatgcggcgctgcgagacacgagaaatcttgcgctgcaaggttggtgcaagc
ctcatccgtcaactttcgggtgtcgcgggacgacgattgccggaacgatcagccgaacaa
cagaatcggcgcccatgctccgacgtcatccccgcctatctcttggggggcaaaaccatg
aagaagtcggtcctgctgggcgcctgttcgatcatcgccatattcgccattgcgccggcc
gccgccgccgcgcagcaggcgcagacgacggccccgccgcccggtcagacgcagacgccg
aacgaaaaggaatcgctggagggcggcgtcccggtgcccgccaacagcgacgccgccgaa
gaggccgaagcacgcaagaacgtcgagcggcaggatgccaaggccgcgggcgccggcgac
cctgacgcccgcgcggccgagagcgaactgcgccgctatcaggacaaggtcgtcacgaag
accaagggcagtgacgacattcaagtgaccggcagccgcctgcgcgacggggataagacc
agccgcctgatcgtcatcgatgcgaaggaaatccgcgaccgcggcgtgaccagcgtcgag
gaactggtccgcaccctgccgcagaacgtcgcgacgatcggcgcgatcaccaacagtcgt
ggtaaggggccgctgaattcaaatgtcggcgttacggggtcaaacatcgtgtccgatgtc
ggcacggtcggtctcgcggcggcgaatctcgggggcgtcggcgcaggcaacacgctggtc
ctcgttaacggccgccggatagccggtgcggccggcgttgagcagggatatgccaatctg
aatggcatcccgctcagcgcgatcgagcgggtcgagatcagcacgggcgggcaatcggcg
atctatggtgccgacgccatgggaggcgtcatcaatttcatcctcaagaagaattacgtg
ggtacgacgatcggagcgtcgcaccgcgagaccagcgcggggtcaaaggacacgcgcatc
agcctatatacaggtcgtgcatggggcagcggcagcatcgccggcacgttggaattcggc
aggatcgatcccatcgtcaacgccaagaccggttatgtaacgaacaactatgcgccgctg
ttcaacaacaatccggcatacgacaaacgctcgctaagtgctggcacgcagccaggcacg
acgctgctgcctggcgtctataatcctgccacgggtcaattcgtgcagagtggtttgacc
gtgccctcaggctttaccggcgcgccgaagcagtctgatctgatcccggcgacgctcagc
accagtcgagactatgtgccgacatatgcagggccgcgaacccgcacgatcagcggaacc
ttgaacttcgaacaaaaaatcacggatcggctgagcgtctacgcaaccgggctctatacg
cgttcgcggaatacgcaggcaaacaacgtattcggcgggctggccgtagggttggcaccg
ggacaatattacaatccgtttccggcattcgctctcggatcgtcggcttacgcgagcaca
gtctattattatccgggcagtgaaattgccgatggctcgctggtgcccacgaatgtccgc
aacacggtcaccgcttggacggccaacgcgggggtcagctatgatttcggcaagactgcg
aaggtgcagctgaactatacgcggtcgcggacgtcgaccgagggctccggaacccagctt
ggcagtttggtcagctttcagcgtactgtgacgaacggtgtcgtcagttacccctgctac
aatttcctgctcgctaacaatcgtgtacctgcaaaccgccgagccgccgtccaggccgca
ttccaagcgcagtgcgctgcactaaccagcaatgatccgaacgtcgccttcaacccgtgg
cgcagcaacgcggcaggcggcggcgcaaacatcaacacctttctctacccctatgtcgtc
gacgacctcggcaacgcgctcagcaatgtcgagggacgcgtgacgggcgaagtcgctgta
ctgcctgcgggggcgatcagctatgccgtgggcgccgaatattcgaagaccacgctcaag
aacagcttcgtcagcgatatcgccggtcccgatccttcgacggatcgctatgctttcttt
ggcgaagtcaacttgccgatcctgggcaaagactatacactgccaatggccaagcgccta
cttttcaacatcgcgatgcgtcgcgacgtgaacagtagtgtcggtgcgattgggacggtc
aatcgggtgccggtcgaccaaggcggcgagatcatttacggtaagaaccgcttcggccgg
acgacaccctcctggggcatgttgtggtcgccgaccaatacgatcgacatccgcgccaag
ttcacgcgcggctttaaggccccgccgcctactcagctttactcggtgcaggggacgacc
cagacgttaacgtcgatcgtcggtgatcctctctatacgtgcaccgtgcagtgcggtcgc
ccgcaaaacggccttccgacgtattcggtacctttgctgaccgtgccaaatccgaatctc
cgacccgaaacgtcacgccagcagatctacagcatcggctggcagcctacaggcgcgctg
tccggcctcagcttggcagtctcatataaccgcaaccgaattcgtaaccagtttgcgacc
gtgcgtgagctttattactacctgccagcaatagaagtgctaaaactgccacttttcttc
ccgcgtgatccagttacgaaccgtatcttgtcgcagaataatgttcgttataatatcgtt
ggatcagactacgaatcattgacgtacgaagcgagttatttgttcgtaacgaattttggc
acatttcaaccgaagataacgtatctcgacaatattgttgccaagaccatcgggctgact
gaaaatcaggtactcgatcagcgggggcgcatacttggtgtcgacaaatacaaagtcgtg
ggttcgcttcagtggaactgggacaaggtcagcacaaatctttatgtatatcacacgccg
agctatttgaacgactacatgtcgatgtatgcggctggcgtgcagctcaatccggagctc
atcacccgggtgaagccactcaccacggtcgatctttcggtgtcctggatcgtgaccaac
cacctcaatgtgcaatttgcaggccgcaacatcttcaaggcggcggcgcccttcaccgtc
gtggattcgcttccctacgacacgtcgcgttacaacatcgaagggcgcagcttgatgctg
tcgacgcgcctcagtttctga
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