Sphingomonas sp. FARSPH: DM480_04810
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Entry
DM480_04810 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_04810
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_04810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
TERF2_RBM
Motif
Other DBs
NCBI-ProteinID:
AXJ96857
LinkDB
All DBs
Position
complement(990057..992567)
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AA seq
836 aa
AA seq
DB search
MPIAASAVEPGADTQQTLVSDAGQQQGNDIIVTGTRATGITAAESAAPIKVLDADTLSHV
GQPNLNQVLTQLVPSFTAQAFGGDTANLTLSARLRGLSPNHTLVLVNGKRRHGTSNLAVL
GGPYQGAATADLDLISPSSIKRIEVLEDGAAAQYGSDAIAGVINIILKDDKEGGDGYVTA
GKNYDVGGDTYAGTLHLATKVGDSGYFNVTAFHRFHDFTRIGGLDRRVTDTTGTLLPLST
PTTYGISAIQRQLYPGMAGFPYVNSINGDAQSRLTNLQYNTAYDFGDSEVYSFGTYSRRI
ASANENVRVPTRVSRTVAGVTTYFDPEGDSPPNGFIPREKIREEDMAFTGGVRGMLSGFH
YDLSTTFGQDKAEIYTVNSANASLFADTGFTPTSFYDGFFKSTEFTANADFTHEIDAGLA
EPINLAFGAEYRRNIYQIGSGDAGSIYKEGGQSYPGFRSSDAGVHGRHAHAAYGDVAAVP
VEGLKLDVAGRYEHYSDFGSRFIYKGTGRYDFSDAFALRGTFSTGFRAPTLAESFYSATN
VSPTSAFVQLPANSAAAKLIGFQNLKPEKSTNYSLGTVIRPVDRLTITLDAYQVRIRDRI
LGTGSIFGSGGAVNFPIVTRAIIANGNVLDPTVSQTGINIFTNGANTRTRGVDLVVSYAT
DFGDCGKANWTISGNYNETKLTKLIAAPVTLTNPRTGQAIPLFDLGAQANIETASPRVKV
ISSVLYTLDKFSATLRGTVYGKSSAQLTPDGGTYYKQTIGTAFIGDIELNYDITSDLSLA
VGANNVFNKRPPTVPLVPGTTNLTLVNGGNVLDAPLTFSPYGINGGYYYARINVSF
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgctgcaagcgccgtcgaaccgggcgccgatacgcagcagacgttggtgtcg
gatgcggggcagcagcagggcaacgatatcatcgtcaccggcacccgcgcgaccggcatc
actgccgcggaaagcgccgcaccgatcaaggtgctcgatgccgacacgctgagccacgtc
ggtcagccgaacctcaaccaagtcctgacgcagctcgtgccgtcgttcaccgcgcaggcc
ttcggtggcgacaccgccaatctgacgctgtcggcgcgactgcgtggactcagtccgaat
cacacgctggtgctcgtcaacggcaaacggcgtcacggcacgtccaaccttgccgtcctc
ggcggcccctatcagggtgccgcgaccgccgatctcgatctcatcagtccctcgtcgatc
aagcggatcgaggtgctcgaggatggtgcggctgcgcaatacggctccgacgcgatcgcc
ggcgtcatcaacatcatcctcaaggacgacaaggagggcggcgacggctatgtgaccgcg
ggcaagaattacgacgtcggcggcgatacctatgcgggcacgctgcacctcgcgacgaag
gtgggcgacagcgggtatttcaacgtcaccgcctttcaccgctttcatgacttcacccgg
atcggcgggctcgatcggcgcgttaccgacaccaccggaacgctgttgccgctgtcgacg
ccgacgacctacggcatcagcgcgattcagcggcaattgtatccgggaatggccggcttt
ccgtacgtcaattcgatcaacggggatgcgcagtcgcggctgaccaacctgcaatacaat
acggcatacgacttcggcgacagcgaggtgtacagcttcggcacctattcccggcggatc
gccagcgccaacgagaacgtccgcgtgcccacccgcgtgtcgcgcacggtcgccggcgtc
accacctatttcgatcccgagggcgacagcccacccaacggattcatcccgcgcgagaaa
atccgcgaggaggacatggcgttcaccggcggcgtccgcggcatgctgagcggatttcat
tacgatctgtcgacgacgttcgggcaggacaaggccgaaatctatacggtcaattccgcc
aacgcctcgctgttcgccgataccggcttcacgccgaccagcttctacgacggcttcttc
aaatcgacggaattcaccgccaacgccgatttcacgcatgagatcgacgccggactggcg
gagccgatcaacctcgccttcggtgccgaatatcgccggaacatctatcagatcggatcg
ggcgatgccgggtcgatctacaaggaaggcggccagtcctatcccggcttccgctcctcc
gacgcgggcgtgcacggccgccatgcgcacgccgcctatggcgatgtcgccgccgtgccg
gtcgaagggctgaagctcgacgtcgccggccgctacgaacattattccgatttcggcagc
cggttcatctacaagggcaccggccgctacgacttttccgacgcgttcgcgctgcgcggt
acgttttcgaccggttttcgcgcgccgacgctggcggaatccttctattcggcgaccaac
gtgtcgccgacatcggccttcgtacagcttcccgccaactccgccgcggcgaagctcatc
ggcttccagaacctgaagccagaaaaatccaccaactactcgctcggcactgtcatccgt
ccagtggacaggcttacgatcacgctcgacgcctatcaggtgcggattcgcgaccgcatc
ctcggcaccgggtcgatcttcggcagcggcggcgccgtgaacttcccgatcgtgacgcgg
gcaatcatcgccaacggcaacgtgctggatccgacggtcagccagacgggcatcaacatc
ttcaccaacggtgccaacacccgcacccgcggcgtcgacctcgtcgtcagctacgccacg
gatttcggcgattgcggtaaggcgaactggacgatctcgggcaattacaacgaaaccaag
ctcaccaagctgatcgccgcgccggtgacgctgaccaatccgcgtaccggacaggcgatc
ccgctgttcgatctcggcgcgcaggccaatatcgaaacggcatcgccgcgggttaaggtg
atctcctcggtgctttacacgctggacaaattctcggcgacgctgcgcggcaccgtttat
ggcaaatcgtcggcacagctaacccccgatggcggcacctattacaagcagacgatcggc
accgcattcatcggcgatatcgaactcaattacgatataacgtccgatcttagcctggcg
gtgggcgcgaacaacgtcttcaacaaacgaccgccgaccgttccgctagtgccggggacg
accaacctgacgctggtcaacggtggcaacgtgctggatgcaccgcttaccttcagcccg
tacggcatcaacggcggatattattacgcccggataaacgtatccttctga
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