Sphingomonas sp. FARSPH: DM480_04920
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Entry
DM480_04920 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_04920
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF1758
Motif
Other DBs
NCBI-ProteinID:
AXJ94944
LinkDB
All DBs
Position
complement(1017025..1019319)
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AA seq
764 aa
AA seq
DB search
MNKYKKYKEGFVMPAKVLLYVSTALFTLHGQAWAQAVPGSVDQAGAPPVSPSTPASGAEA
EEKSVQDGGLADIVVTAQRRSENSQRVPIAVSVATADTLTQSGVGDIQALKVAIPSVDLQ
SLNGYALPIIRGVGSKAAFPGIEPPVAVYVDGVYYANPTGTVLGFNNIEQIEVLKGPQGT
LFGRNATGGLLQISTRDPSQTLGGQVNLSYGNYQTVRGDFYLTAGVAQNLAADIAFTGTH
QGKGYGTNLLSGRDVYRTDHDIGVRSKWLWEPGTDTSVRLILDYASYANSNNAVRIKRDT
TIPAPYGPNYGGDDWDIASNQEPRTHFDGGGASVRVDHDFGTLKIASISAYRKSTSGAAF
DFDYTPTNGRAVDLKSRDHQFSQELQLLSPSGGWLSWVAGAYYFTASSGYPFFDVLLNGP
VLIPTVPPTNRVRTISTQTTDSLSGFGQATAQLVDGLKATVGLRYTDETRKLVDASVTQF
RTDGSSVTSIPQFSDRRHYGKLTWRFALDYSFTPDILTYVSYNRGFKSGGFNSNSIAVGP
FLPETLDAYEVGLKSTILNRRVRFNLAGFYYDYRDVQVQRVTTAGTGIYNSGKETVYGLE
ADLEAKLSARLGLRLNYQFIPHAQYDNFPGAVIATPRAAGGYFITTGSASGNRAVLSPRN
TANAALDYKLPVSSGDVDFNASVYYNSGIFNDPDNLIKQPAYALVNLSARYRATSGYSVA
AWVRNLTNEAVSAIDGIQTFGATGANRVGYAPPRTYGVTVGYAF
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatacaaaaaatataaggaggggttcgtgatgccagcgaaggttttactatac
gtgagcaccgcacttttcactttgcacgggcaggcttgggcacaagccgtgccgggttcg
gtcgaccaggcaggcgcgccgcccgtatcgccgtccacccccgcatcgggcgccgaagcg
gaggaaaaatcggtacaggacgggggactcgcggacatcgtggtcacggcccagcgacgc
agcgagaacagccagcgcgttccgatcgccgtatcggtcgcgaccgcggacacgctgacg
cagtccggtgtcggcgacatccaggctctcaaggtcgcgatcccgagcgtcgatctgcag
tcgctgaacggctacgccttgccgatcatccgtggcgtcggatcgaaggcggccttcccc
gggattgagccgccggtggcggtctacgtggacggcgtctattacgcgaaccccaccggc
acggtcctcgggttcaacaacatcgagcagatcgaggtcctgaaagggccgcagggaacg
ctgttcggccgcaacgcgaccggtggccttctgcagatcagcacgcgcgatccttcgcag
accttgggcggtcaggtgaacctgagctatggcaactaccagacggtgcgaggtgacttc
tacctgacggcaggggtcgcccagaacctcgcggcggatattgccttcaccggcacgcac
cagggcaagggctacggcaccaacctgctgtcgggccgcgatgtctaccggactgaccac
gacatcggcgtccgctccaaatggctgtgggagcccgggacggatacaagtgttcgactg
atcctcgactacgcaagctatgccaacagcaacaacgccgtccgcatcaagcgggacacg
acgatcccggcgccctatgggcctaactatggcggggacgactgggacatcgccagcaat
caggagccgcggacacattttgacggaggcggcgccagcgtccgggtcgatcatgacttc
ggcacactgaagatcgcgagcatttccgcctatcggaaatcgacttcgggcgcagcgttc
gactttgactacacgccgaccaacggacgtgccgtcgacctgaaaagccgtgaccatcag
ttcagccaggagctgcagctcttgtcgccgtccggcggctggctcagctgggtcgcggga
gcctattatttcacagcgtcgagcggttacccgttcttcgatgtactgctaaacggaccg
gtattgatcccgacggtgccgccgacgaaccgggtacgaacgatcagcacgcaaacgacg
gactcgctgtcggggttcggtcaggccacagcgcaactggtcgacgggcttaaggcgacc
gtcggtctccgctacaccgacgagacccgtaagctggtcgacgcatccgtcacgcagttc
cgcacggatggatcaagcgtcaccagcatcccgcagttcagcgatcggcgtcattacgga
aagctgacgtggcggtttgcgctcgactatagcttcacgcctgacatcctgacctacgtg
tcctacaatcgtggcttcaagagcggcggtttcaactccaactcgatcgctgtcggcccg
ttcctaccggaaacgctcgatgcgtatgaagtcggattgaaatcgactattctgaatcgt
cgggtgcggttcaatctcgccggcttctactacgattacagggacgtacaggttcagcgc
gtcacgaccgcgggcacgggcatctacaatagcggcaaggaaaccgtttacgggctcgaa
gccgatctagaggcgaagctgtcggccagattgggtcttcgcctcaactaccagttcatc
ccgcacgcccagtacgacaacttccccggcgcggtcattgccacgccgcgtgcggcgggc
ggctatttcatcacgaccggctcggcgagcggcaaccgcgcggtgctcagtccgcggaac
accgccaatgccgctctcgactacaagttgccggtgtcgagcggggacgtcgatttcaat
gcgagcgtctattacaacagcggcatcttcaacgaccccgataacctcatcaagcagccg
gcctacgcgctggtgaacctttcagcgcggtatcgtgcgacatcgggctattcggtggcg
gcctgggtgcgcaacctgaccaacgaagccgtatcagcgatcgacggcatccagacgttc
ggcgccaccggggcgaaccgtgtcggctacgcgccgccacgcacctacggcgtcaccgtc
ggctacgccttctaa
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