Sphingomonas sp. FARSPH: DM480_06070
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Entry
DM480_06070 CDS
T05685
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM480_06070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphf03400
]
DM480_06070
Enzymes [BR:
sphf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DM480_06070
DNA repair and recombination proteins [BR:
sphf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM480_06070
Prokaryotic type
DM480_06070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AXJ95137
LinkDB
All DBs
Position
1258818..1259516
Genome browser
AA seq
232 aa
AA seq
DB search
MTDPRMDASWLAPLRAEFDSPYMAALRQFLKAEKAAGKRIFPHSDDWFRALELTPLDAVR
VVILGQDPYHGAGQAHGLCFSVRPGVKPPPSLVNIYKEMHDDLGIAPVRHGFLEPWARQG
VLLLNSVLTVEEARAAAHRERGWEKFTDAIVRLVAAKDDPVVFMLWGSYAQKKAAFVADV
ARGGRHLVLKAPHPSPLSAHTGWFGSGHFSKANAFLAAHGRGRIDWALPAEV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccgcgtatggacgccagctggctcgccccgctgcgcgccgaattcgacagc
ccgtatatggcggcgctgcgccagttcctgaaagccgaaaaagcggcgggcaaacgcatc
ttcccgcattccgacgattggttccgcgcgctggagctgaccccgctcgatgcggtgcgc
gtcgtcatcctggggcaggacccgtatcacggcgcgggccaggcgcatggcctgtgcttc
tccgtccgccccggcgtgaagccgccgcccagcctcgttaacatctacaaggaaatgcac
gacgacctgggcatcgcgccggtgcgccacggcttcctcgagccctgggcgcggcagggc
gtgctgctgctcaacagcgtactgaccgtcgaggaggcgcgcgccgccgcgcaccgcgag
cgcggatgggaaaagttcaccgacgcgatcgtccgcctcgtcgcggcgaaggacgatccc
gtcgtcttcatgctgtggggcagctatgcgcagaagaaggcggcgttcgtcgccgacgtc
gcgcgcggcggccggcatctggtgctgaaggcgccgcacccctcgccgttgtccgcacat
accggctggttcggcagcggccatttcagcaaggcgaacgcgtttctggcggcgcacggc
cgcgggcggatcgactgggcgctgccggcggaggtgtga
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