Sphingomonas sp. FARSPH: DM480_06555
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Entry
DM480_06555 CDS
T05685
Name
(GenBank) helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sphf03029
]
DM480_06555
Enzymes [BR:
sphf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DM480_06555
Mitochondrial biogenesis [BR:
sphf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
DM480_06555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AXJ95218
LinkDB
All DBs
Position
complement(1340504..1342999)
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AA seq
831 aa
AA seq
DB search
MAGGVTAVLGPTNTGKTHLAVERMCGHSSGIMGFPLRLLAREVYDRVVAQKGPDQVALVT
GEEKIVPANARWFLCTAESMPEHDAAFVALDEAQLGTDPERGHVFTDRLLRRRGREETMI
LGSEALRPMVRALVPDAEIIGRPRFSKLTYAGAKKISRLPKRSAIVAFSAEEVYAVAEML
RRLRGGAAVVMGALSPRTRNAQVAMFQAGEVDYLVATDAIGMGLNMDVAHVAFAGLTKFD
GRRQRRLTVAEMAQIAGRAGRHQRDGTFGAITEDGPGAFLPEEVLAIEEHRFKPIEQMYW
RSGEPDFSSVDALIASLERRPEPGVLIAAPQAMDLAVLKRLAEEAWVRDRARGAAMVKRL
WAACGLPDFRKLGLDPHARFVSRLFGYLSEGRMVAPHQWFADEIARLDTIAGDVETIAGR
IAAIRTFAYIAHRPDWLAEPQLWAERTRSIEERLSDGLHASLTQRFVDKRTTALIRQIGA
DAGALPVTIGPEGEVLVEDHAIGRLDGFRFTVDPAARAGDRRLLLAAAEKRLVGERGRRV
QALSEAEDAAFTLVDDSVLWRGHPVARLVAGPSPARPMLKLDRDLDCLDKAQRGGVQTRL
DQWLTAMLARHVPALVALATLARDPAATPALRVVAGELEAAGGLAPRVALHEPLAALTPD
ERKRLRKAGVTIGALDLFDPRLLKPAAAAWRRTLIGLRGPVPMLPPEGATVLVRGAPGAM
LATGFRPLAAQAVRVDLVERIARAAHDAREGRKPFAPDPALATSMGLEPATLARLMAELG
FQPARGEGATWVWRGRRAPRRDLRPPPPATGAFAALAGWGQTGEQAGGRHG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtggcgtcaccgcggtcctgggaccgaccaataccggcaagacccacctcgcg
gtcgagcggatgtgcggtcattcgagcggtatcatgggctttccgttgcggctgctcgcc
cgcgaagtctacgaccgcgtcgtcgcccagaaggggccggaccaggtcgcgctggtgacc
ggcgaggaaaagatcgttcccgcgaacgcgcgctggttcctgtgcaccgcggagagcatg
cccgaacatgacgccgccttcgtcgcgctcgacgaggcgcagctgggcaccgatccggaa
cgcggccacgtcttcaccgaccgcctgctgcgccggcgcgggcgcgaggagacgatgatc
ctggggtcggaggcgctgcgcccgatggtgcgcgcgttggtgcccgatgcggagatcatc
ggccggccgcgcttttcgaaactgacctatgcgggcgcgaagaagatcagccgcctgccc
aagagatccgcgattgtcgcgttcagcgccgaggaagtctatgccgtcgccgagatgctg
cgccggctgcgcggcggcgccgcggtggtgatgggtgcgctcagcccccgcacgcgcaac
gcgcaggtcgcgatgttccaggccggtgaggtcgattatctcgtcgcgaccgatgcgatc
ggcatgggcctcaacatggacgtcgcgcacgtcgccttcgccgggctcaccaagttcgac
gggcggcggcagcggcggctgacagtggcggagatggcgcagatcgccgggcgcgccggg
cggcaccagcgcgacggcacgttcggcgcgatcactgaagacgggccgggcgcgttcctg
cccgaagaggtgctcgccatcgaggagcatcgcttcaagccgatcgagcagatgtactgg
cgcagcggcgagccggatttttcgagcgtcgatgcgctgatcgccagcctggagcggcgg
cccgagcccggcgtgctgatcgccgcgccgcaggcgatggacctggcggtgttgaagcgg
ctggccgaggaggcgtgggtgcgcgaccgcgcgcggggcgccgcgatggtcaaacggctg
tgggcggcgtgcggcctgcccgatttccgcaaactgggcctcgatccgcatgcgcggttc
gtgtcgcggctgttcggctatctcagcgaggggcggatggtcgcgccgcaccaatggttc
gcggacgagatcgcgcggctcgatacgatcgcgggcgacgtcgagacgatcgcgggccgg
atcgcggcgatccgcaccttcgcctatatcgcgcaccgccccgactggctggccgagccg
cagctgtgggcggagcggacgcgcagcatcgaggagcgtctgtccgacgggctgcacgcc
agcctgacgcaacggttcgtcgacaagcgcacgaccgcgctgatccgccagatcggcgcg
gacgcgggcgcgttgccggtgacgatcgggccggagggggaggtgctggtcgaggaccat
gcgatcggccgactcgacggctttcgcttcaccgtcgatcccgcggcgcgggcgggcgac
cggcgcctgctgctcgcggcggcggagaaacggctggtcggcgagcgcgggcggcgcgtg
caggccctgtcggaggcggaggatgcggccttcacgctggtcgacgattcggtgctgtgg
cgcgggcatccggtcgcgcggctggtcgcggggccgtcgcccgcgcgcccgatgctgaag
ctcgaccgcgatctcgactgtctcgacaaggcgcagcgcggcggcgtgcagacacggctg
gaccaatggctgacggcgatgctggcgcggcatgtccccgcgctcgtcgcgctcgcgacg
ctggcgcgcgatccggcggcgacgccggcgctgcgcgtcgtcgcgggcgagctggaggcg
gcaggcggcctcgcgccgcgcgtcgcgctgcacgagccgctcgccgcgttgacgccggac
gagcgcaaaaggttgcgcaaggcgggggtgacgatcggggcgctcgacctgttcgatccg
cggctgctcaagcctgcggcggcggcgtggcggcgcacgctgatcgggctgcgcggaccg
gttccgatgctgccccccgagggcgcgacggtgctggtgcgcggcgcgccgggggcgatg
ctggcgacgggattccggccgctggcggcgcaggcggtgcgcgtcgacctggtcgaacgg
atcgcgcgcgccgcgcatgacgcgcgcgaggggcgcaagcccttcgcgcccgatccggcg
ctggcgacgtcgatggggctggagccggcgacgctggcgcggctgatggcggaactgggc
ttccagccggcgcggggcgagggggcgacctgggtgtggcgcgggcggcgtgcgccgcgc
cgcgacctgcgcccgccgccgcccgcgacgggcgccttcgcggcgctcgccggatggggg
cagacgggggagcaggcgggaggacggcatggctga
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