Sphingomonas sp. FARSPH: DM480_06835
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Entry
DM480_06835 CDS
T05685
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf03030
DNA replication
sphf03430
Mismatch repair
sphf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM480_06835 (dnaQ)
03430 Mismatch repair
DM480_06835 (dnaQ)
03440 Homologous recombination
DM480_06835 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphf03032
]
DM480_06835 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sphf03400
]
DM480_06835 (dnaQ)
Enzymes [BR:
sphf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM480_06835 (dnaQ)
DNA replication proteins [BR:
sphf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM480_06835 (dnaQ)
DNA repair and recombination proteins [BR:
sphf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM480_06835 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AXJ96906
LinkDB
All DBs
Position
complement(1398658..1399350)
Genome browser
AA seq
230 aa
AA seq
DB search
MREIVFDTETTGLSFAGGDRLVEIGCVELVNRVETGRTFHAYYHPERSMPAEAQAVHGIS
DAFLADKPLFGAMVHELLDFIGDAPLVAHNAGFDFSFINGELSRCGRDPVCTSRMIDTLA
IARQRHPGAKHTLDALCSRFGVDRSHRVLHGALLDAQLLAQVYVELMGGRQIGLGLVSEV
IADNDATTGARRPSIVRPPRHFAAPPAELAVHAAFVATLDNPLWEVGSPA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgtgttcgacaccgaaaccaccggcctcagcttcgccgggggcgaccgc
ctcgtcgagatcggctgcgtcgagctggtcaaccgcgtcgagacgggccgcaccttccac
gcttattaccatcccgaacgcagcatgcccgcggaggcgcaggcggtgcacggcatttcg
gacgccttcctggccgacaagccgctgttcggcgcgatggtgcacgaactgctcgacttc
atcggcgatgcgccgctcgtcgcgcacaacgccggcttcgatttcagcttcatcaacggc
gagctcagtcgctgcggccgtgacccggtgtgcaccagccgaatgatcgacacattggcg
atcgcgcggcaacggcatccgggtgcgaagcatacgctcgatgctttgtgctcgcgattc
ggcgtcgaccggtcgcatcgcgtgctgcacggcgcgctgctcgacgcgcaattgctggcg
caggtctatgtcgagctgatgggcgggcggcagatcgggctcggcctcgtcagcgaggtg
atcgccgataacgacgccacgacgggcgcgcgccggcccagcatcgtccggccgccgcgg
cacttcgccgcaccgccggcggaacttgccgtgcacgcagcctttgttgctacgctggac
aatccgctgtgggaggtcggatcgcccgcttga
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