Sphingomonas sp. FARSPH: DM480_07560
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Entry
DM480_07560 CDS
T05685
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphf03016
]
DM480_07560
Enzymes [BR:
sphf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DM480_07560
Transfer RNA biogenesis [BR:
sphf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DM480_07560
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AXJ95394
UniProt:
A0A345WNZ2
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All DBs
Position
complement(1542052..1542672)
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AA seq
206 aa
AA seq
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MTVHFHEEDLPADVFAPGAAIAVDSETMGLITPRDRLCVVQLSDGGPDEHLVRFAPGSDY
AAPNLKAVLADPSRLKLFHYGRFDVAAVQHYLSVVAAPVWDTKIASRLVRTYTDRHGLKE
LVRELLGQELSKQQQSSDWGGPELSDAQKDYAASDVRFLHRLKDELERRLIRENRLHLAQ
ACFDFLPTRAALDLAGWPEIDIFAHA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacacttccacgaggaagacctccccgccgacgtcttcgcccccggtgccgcg
atcgcggtggacagtgagaccatgggcctcatcacgccgcgcgaccgattgtgcgtcgtc
cagctgtccgacggcgggcccgacgagcatctcgtccgcttcgcgccgggcagcgactat
gccgcgcccaacctcaaggcggtgctcgccgacccttcgcggctgaagctgttccactat
ggccgtttcgacgtcgccgccgtgcagcattacctaagcgtcgtcgccgcgccggtgtgg
gatacgaagatcgcctcgcgcctggtgcggacctacaccgaccgccacggcctgaaagaa
ctggtgcgcgaattgctcggccaggaattgtcgaagcagcagcagtcgtccgactggggc
gggcccgagctcagcgacgcgcagaaggattatgccgccagcgacgtgcgcttcctccat
cgcctcaaggacgaactggaacggcgcctgatccgcgagaaccgcctgcacctggcgcag
gcgtgtttcgatttcctgcccacgcgcgccgcgctcgatctcgccggctggccggagatc
gatatcttcgctcacgcgtag
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