Sphingomonas sp. FARSPH: DM480_08475
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Entry
DM480_08475 CDS
T05685
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sphf03110
]
DM480_08475 (clpB)
Chaperones and folding catalysts [BR:
sphf03110
]
Heat shock proteins
HSP100
DM480_08475 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
IstB_IS21
bpMoxR
AAA_7
TniB
RuvB_N
NACHT
AAA_25
AAA_24
NBD_SMAX1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AXJ95543
LinkDB
All DBs
Position
complement(1734881..1737460)
Genome browser
AA seq
859 aa
AA seq
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MNLEKFTDRAKGFLQSAQTVAIRMNHQQIAPEHLLKALLEDEQGMAAGLIQAAGGDPRRA
IADTDLALAKIPAVSGSGAQSSPGLSNDAVRVLDQAEQIAQRAGDSFVTVERLLVALALS
LNTAAGKALQASGATAEGLNAAINQLRQGRTADTAGAEDRYDALKKFARDLTQAARDGKL
DPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIANGDVPDGLKDKTL
MALDMGALIAGAKYRGEFEERLKGVIDEVKAAEGDIILFIDEMHTLIGAGKSEGAMDAGN
LLKPALARGELHCVGATTLDEYRKHVEKDPALQRRFQPVFVGEPTVEDTISILRGLKDKY
EMHHGVRITDGALVSAATLSNRYITDRFLPDKAIDLMDEAASRIRMEVESKPEEIESLDR
RILRLKIEREGLRRETDEASQDRLEKIEGELANLEQQSAELTTRWLAEKDKIAGEAKLKE
QLDAARLELDQAQRGGDLAKAGELSYGRIPALEKQLAEAQGSTKGAMLREEVTADDIAGV
VSRWTGVPVDRMLEGEREKLLRMEEVLGARVIGQSEAVRAVSTAVRRARAGLQDPNRPLG
SFLFLGPTGVGKTELTKALAEFLFDDASAMVRIDMSEFMEKHAVARLIGAPPGYVGYEEG
GVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGRLTDGQGRTVDFSNTIIILTSN
LGSQYLANLEEGQAVDTVEPQVMEIVRAHFRPEFLNRLDEVILFHRLGQAHMGPIVDIQV
ARVGKLLADRKVTLDLTDAARAWLGRVGYDPVYGARPLKRAVQRYLQDPLAEAILRGEVK
DGSIVHVDEGEGRLVLNVS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgaaaaattcaccgaccgggcgaagggctttttgcagtccgcgcaaaccgtc
gcgatccgcatgaaccatcagcagatcgcccccgaacatctgctgaaggcattgctcgag
gacgagcagggcatggccgcaggcctgatccaggcggcaggcggagacccgcgccgcgcc
atcgccgacaccgatcttgccttggcgaaaatccccgccgtctcgggttcgggcgcgcaa
tcctcgcccggactgtcgaacgatgctgtccgcgtgctcgatcaggcggaacagatcgcg
cagagggcgggcgacagcttcgtcaccgtcgaacggttgctcgtcgcgctggcgctgtcg
ctcaacaccgccgcgggtaaggcgctacaggcatcgggcgcaaccgcggaggggctcaac
gccgcgatcaaccagctgcgtcaggggcggaccgccgacaccgcaggcgccgaagaccgg
tacgacgcgctcaagaagttcgcgcgcgacctgacgcaggcggcgcgcgacggcaagctc
gaccccgtgatcggccgcgacgaggagatccgccgcacgatccaggtgctcgcgcgccgc
accaagaacaaccccgtgttgatcggcgaacccggcgtcggcaagaccgcgatcgtcgag
ggcctcgcgctacgcatcgccaacggcgacgtgcccgatggcctgaaggacaagacgttg
atggcgctcgacatgggcgcgctgatcgcgggcgcgaaatatcgcggcgagttcgaggag
cggctgaaaggcgtcatcgacgaggtgaaggccgccgagggcgacatcatcctgttcatc
gacgagatgcacacgctgatcggcgcgggcaaatccgaaggcgcgatggacgcgggcaat
ctgttgaaacccgcgctcgcccgtggcgaactgcactgcgtcggcgcgaccacactcgac
gaatatcgcaagcatgtcgagaaggaccccgcgctccagcggcgcttccagcccgtcttc
gtcggcgagccgaccgtcgaggatacgatcagcatcctgcgcgggctcaaggacaaatat
gaaatgcaccacggcgtgcgcatcaccgacggcgccctggtgtcggcggcgacgctgtcc
aaccgctacatcaccgaccgcttcctgcccgacaaggcgatcgacctgatggacgaggcc
gcgagccgaatacggatggaagtcgaatcgaaaccggaggagatcgaaagcctcgaccgt
cgcatcctgcgcctcaagatcgagcgcgagggccttcgccgcgagacggacgaggcgtcg
caggaccggctcgagaagatcgagggtgaactcgcgaacctcgaacagcaatccgccgag
ctgaccacgcgctggcttgcggagaaggacaagatcgcgggcgaggcgaagctcaaggaa
cagctcgacgccgcgcggctcgaactggaccaggcgcagcgtggcggcgacctcgccaag
gcgggcgagctgtcctacggccgcatcccggcgctcgagaagcagctcgcggaggcgcag
ggctccaccaagggcgcgatgctgcgcgaagaggtgaccgccgacgatatcgccggggtc
gtcagccgctggaccggcgtgcccgtcgatcggatgctggagggcgagcgcgagaagctg
ctgcggatggaagaagtgcttggcgcgcgtgtcatcggacagagcgaggcggtgcgcgcc
gtgtcgaccgcggtacggcgcgcgcgcgcggggctgcaggatccgaaccggccgctgggc
agcttcctgttcctggggccgacgggcgtcggcaagaccgagctgaccaaggcgctcgcc
gaattcctgttcgatgatgcatccgcgatggtgcgcatcgacatgagcgagttcatggag
aagcacgccgtcgcccgcctgatcggcgcgcccccgggctatgtcggttacgaggaaggc
ggcgtgctgaccgaagcggtgcgacgccggccgtatcaggtcgtgctgttcgacgaggtg
gagaaagcgcacggcgacgtgttcaacgtgctgctccaggtgctcgacgacggccgcctg
accgacggtcagggccgcacggtcgatttcagcaacacgatcatcatcctgaccagcaac
cttggcagccagtatctcgccaatctcgaggaaggccaggcggtcgacaccgtcgagcca
caggtgatggagatcgtccgcgcgcatttccggcccgagttcctcaatcggctggacgag
gtgatcctgttccatcgcctgggccaggcgcatatggggccgatcgtcgacatccaggtc
gcgcgcgtcggcaagctgctcgccgaccgcaaggtgacgctcgacctgacggatgcggcg
cgggcgtggctaggccgggtcggctacgaccccgtctacggcgcgcggccgctcaagcgc
gcagtgcagcggtatctccaggatccgctggcggaggcgatcctgcgcggcgaggtgaag
gacgggtcgatcgtgcatgtcgacgagggcgagggacggttagttttgaatgtcagctaa
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