Sphingomonas sp. FARSPH: DM480_08680
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Entry
DM480_08680 CDS
T05685
Name
(GenBank) septal ring lytic transglycosylase RlpA family lipoprotein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphf01011
]
DM480_08680
Enzymes [BR:
sphf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DM480_08680
Peptidoglycan biosynthesis and degradation proteins [BR:
sphf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DM480_08680
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
PAS_8
ERbeta_N
Motif
Other DBs
NCBI-ProteinID:
AXJ95579
UniProt:
A0A345WPH7
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All DBs
Position
complement(1779845..1780402)
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AA seq
185 aa
AA seq
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MTGAAAGITLALALAACAGGYRPVSDTPVRIGRPYTVRGHTYVPAAQPGYDMLGYATWYG
GESGNRTALREKFRPRWPTAAHRTLPLPSYIEVTALDTGARILVRVNDRGPFGGGDSRII
DLSRAAADMLGLRGGPAAVRVRVVEPGERDRARLRRGKPAAALPPIPADQVRALRTQLGG
AIPSR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgcggccgccggcatcacactcgcgctggcgctcgccgcctgcgcgggcgga
tatcggccggtcagcgacaccccggtccgcatcggccggccctatacggtgcgcgggcat
acttacgttccggcggcgcagccgggctacgacatgctgggctatgcgacatggtatggc
ggcgaatcgggcaatcgcaccgcgctcagggaaaaattccgcccgcgctggccgaccgcg
gcgcaccgcaccctgccgctgcccagctatatcgaggtgaccgcactcgacaccggcgcg
cgcatccttgtgcgcgtcaacgatcgcgggccgttcggcggcggcgacagccggatcatc
gacctgtcgcgcgccgccgccgacatgctgggcctgcgcggcggcccggcggcggtgcgg
gtgcgcgtcgtcgagcccggcgagcgcgaccgtgcccgcctgcgccgcggcaagcccgcc
gccgcgctgccgcccattcccgcggatcaggtgcgcgccctccgcacgcaactcggcggc
gccattccctcgcgctga
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