Sphingomonas sp. FARSPH: DM480_08995
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Entry
DM480_08995 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_08995
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_08995
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AXJ95627
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Position
1871752..1874790
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AA seq
1012 aa
AA seq
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MTIAYRRQLLATSLLVGAAMLVNPALAQQAGAPAQATPATTTNDQAASPAATGQTPAGDN
ATSTQAPTPGGDIVVTGSRIASPAAASASPLQVIGAEQIQQQGAINVQEVLQLNPAFGSP
GISRTNSSFATQGAGAATVNLRNLGEDRTLVLVNGRRFVSGQPGSQAVDLNVIPTQFIDR
IDVLTGGASAVYGSDAVAGVVNIIYKKNYEGLQLDAQTGISEHGDGADRQVSLLGGKNFA
DGRGNIMLFGSYSKQGTVLKRNRSTEAGSSAVDSTSLGAQNGNDADLFTPRVLLSGFAPG
GRIYAGPVDPATGLRQTFSYNTGSLVNCTGVSCGGFNRSDYRYLAVPVERYVAAGRANFE
VSPAANLWLEGNYAKTKVQTSIEPFPLSSDLVAIATNGNVPIQTRVNGVVYRNPFVPDAI
FNAATDTDGDGLRDIYFDRRLADFGPRTSSADRDLFRIAGGLNGSFGGNRWSYEVYGIYG
QSKEHQVGSGQFDSRNFVNALNSYRDPATGQIVCADATARAAGCIPANIYGIGTLAAAAP
YLAVPTTLDAKITQTVAGGNVTGKLFSLFGADPIGVNIGTEYRRETSSNTFDLLTQQGLN
GNNALPATSGSFHLWEGFAEAIVPIIQDKPFFHSLSVRGAVRVSDYSTIGTTFSYNYGGE
WAPVEDIRFRVIKARSVRAPNINELFQPAQQDFPSGLQDPCKGVTATTTGTVATNCRAAP
GVAANIAANGAFTVSQADLQGITSFGGGNPNLSEEKGDSFTAGVVINPRSINALRNFVLT
VDYFNVRVKGAIVSTPLQFILNQCYAASDQTACARIVRRATPVGPNSAGSLDEVNTSPTN
SGGVKTSGIDTTVTWRQNLSDWGLDGTLGVRGSYTHLISGYTVPLPGSPRDYFAGEIGAS
RDKFTINSSYDLKGVGLTLTGTWLSQASLDDQLTGARPGTNPLYRVRPQFYLDSQIRFRT
KDNFEFFVGGDNLLNNKPPYLADIGASAGQDTDAGTYDPLGRRYYAGVRIGF
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgcgtaccgtcgccagttgcttgcgacatctcttctcgtcggcgccgccatg
ctggtgaacccggcgctcgcgcagcaggccggtgcgcccgcgcaggcgacccccgcgacc
acgaccaacgaccaggcggccagccccgccgcgaccggccagacccccgccggcgacaat
gccacgtcgacgcaggcgccgacgccgggcggcgacatcgtcgtcaccggttcgcgcatc
gcctcgcccgccgccgccagcgcgtcgccgctgcaggtgatcggcgcggaacagatccag
cagcagggcgcgatcaacgtccaggaagtgctgcagctcaaccccgccttcgggtcgccg
ggcatcagccgcaccaactcgtcgttcgcgacgcagggcgccggcgccgcgaccgtcaac
ctgcgcaacctgggcgaggaccgcacgctcgtcctcgtcaacggccgccgcttcgtctcg
ggccagccgggcagccaggcggtcgacctcaacgtcatcccgacgcagttcatcgaccgg
atcgacgtgctgaccggcggcgcctcggccgtctacggctccgacgcggtcgccggcgtc
gtcaacatcatctacaagaagaactacgaaggcctgcagctcgatgcccagacgggcatt
tccgagcatggcgacggcgccgaccgccaggtcagcctgctcggcggcaagaacttcgcc
gacggccgcggcaacatcatgctgttcggcagctattcgaagcagggcaccgtcctcaag
cgcaaccgctcgaccgaagcaggctcgagcgcggtcgattcgacgagcctcggagcgcag
aacggcaacgacgcggacctgttcacgccgcgcgtcctgctgtcgggcttcgctcccggt
ggtcgcatctatgcaggcccggtagacccggcgaccggccttcgtcagacctttagctac
aatacgggctcgttggtgaattgcaccggcgtcagctgcggtggcttcaaccgttcggat
tatcgttacctcgcggtgccggtcgagcgctacgtcgccgcgggccgcgcgaatttcgaa
gtgtcgccggctgccaatctctggctggaaggtaactacgccaagaccaaggtgcagacg
tcgatcgagcctttcccgctcagttctgatctggttgccattgcgacaaatggcaatgtg
ccgatccagacccgcgtcaatggcgtggtttatcgcaatcccttcgtgcccgacgcgatt
ttcaatgcagcgaccgacacggatggtgatggcctccgcgacatctacttcgatcgtcgc
ctcgccgacttcggtccgcgcaccagctcggcggatcgcgacctgttccgcatcgccggc
ggcctcaacggcagcttcggcggcaatcgctggagctacgaggtctacggcatctacggc
cagagcaaggagcatcaggtcggcagcggccagttcgacagccgtaacttcgtgaacgcg
ttgaattcttatcgtgatcccgcgaccggtcagatcgtctgtgccgacgcgacggcgcgt
gcggcgggctgtattccggcgaacatctacggcatcggtacgctcgcggcggcggcgccg
tacctcgcggtgcctaccacgctcgatgccaagatcacgcagacggtcgccggcggtaac
gtcaccggcaagctgttctcgctgttcggcgcagacccgatcggcgtcaacatcggcacc
gaatatcgccgcgaaaccagcagcaacactttcgacttgctgacgcagcagggattgaac
ggcaacaatgcgctgccggcgacctcgggcagcttccacctgtgggaagggttcgcggag
gcgatcgtcccgatcatccaggacaagccgttcttccactcgctgtcggtgcgcggtgcg
gtgcgcgtttccgattattcgacgatcggcacgacgttcagctacaactacggcggcgaa
tgggctcccgtggaggacatccgcttccgcgtgatcaaggcccgctccgtgcgcgcgccg
aacatcaacgaactgttccagcccgcgcagcaggacttcccctcgggtctgcaggatccg
tgtaagggcgtcacagcgacgactaccggcacggtggcgactaattgccgcgccgcgcct
ggcgtggcggcgaacatcgcggccaacggcgcgttcaccgtcagccaagccgatcttcag
ggcatcaccagcttcggcggcggcaacccgaacctcagcgaggaaaagggcgacagcttc
accgccggtgtcgtgatcaatccgcgttcgatcaatgcgctgcgcaacttcgtcctgacg
gtcgactacttcaatgtccgcgtgaagggcgcgatcgtatcgaccccgctgcagttcatt
ctgaaccagtgctatgcggcgtctgaccaaacggcatgcgctcggattgtccggcgtgcg
accccggtaggcccgaacagcgcgggttcgctggacgaagtcaacaccagcccgaccaac
agcggcggcgtaaagacgtccggcatcgatacgacggtgacctggcgtcagaacctctcc
gactggggtctggacggtacgctcggcgtgcgtggttcgtacacgcatctgatctcgggc
tacaccgtgccgctgcctggctcgccgcgcgactatttcgccggggaaatcggggcgtcg
cgtgacaagttcacgatcaacagctcctacgacctcaaaggcgtcggcctgacgctgacc
ggcacgtggctcagccaggcgagccttgacgatcagctgacgggggctcgtccgggcacc
aatccgctgtaccgcgtgcgcccgcaattctacctcgactcgcaaatccgcttccgcacg
aaggacaatttcgaattcttcgtcggcggcgacaatctgctgaacaacaagccgccgtat
cttgcggacatcggcgcgtcggcgggtcaggacaccgatgcgggcacgtatgacccgctc
ggccgccgctattatgcgggcgtgcgcatcgggttctga
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