Sphingomonas sp. FARSPH: DM480_09010 Help Entry DM480_09010       CDS       T05685                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism sphf  Sphingomonas sp. FARSPH Pathway sphf03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:sphf00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     DM480_09010  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sphf03400]     DM480_09010 DNA repair and recombination proteins [BR:sphf03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      DM480_09010   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       DM480_09010 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_21 nSTAND1 AAA_25 DnaJ_CXXCXGXG AAA_23 DUF4350 Motif Other DBs NCBI-ProteinID:  AXJ95630 UniProt:  A0A345WPM8 LinkDB All DBs Position 1879031..1881934 Genome browser AA seq 967 aa AA seqDB search MSLTTISVRGAREHNLKDVDVDIPRDTLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLS AYARQFLELMQKPDVDHIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIP YSPATGEPIAAQTVSQMVDRVMTLPEGTRLYLLAPVVRGRKGEYRKELAEWQKAGFTRVR IDGQIHEIDEAPALDKKFKHDIEVVVDRLVIREDIATRLAESFETALALADGLAYVDPAD PVEPHTPKSAVLGDHAPPGRIVFSEKFACPVSGFTIPEIEPRLFSFNAPQGACPACDGLG EKLLFDEDLVVPNHDLSIKKGAVVPWAKSNPPSPYYMQVLGSLARELKFDLETPWKDLHP EIRDKILFGTGKTAVTLTFIDGKKSYDVKKPFEGVIGNLNRRMLQTESAWMREELSRYQS SRPCEVCHGARLKPEALAVKIAGQDIAHATHLSVVDALAFFTAMPATLSDQQRAIAERIL KEIVERLGFLNNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLH QRDNDMLLATLRRLRDLGNTVLVVEHDEDAIRTADYVIDMGPGAGVHGGQVVAKGTLPEL LASEGSVTADYLNGVREVPVPDARRKGNGKKLTVHNARANNLTGVTASIPLGTFTCITGV SGSGKSSFTIDTLFAAAARQLNGARILAGKHDKITGLQHLDKVIDIDQSPIGRTPRSNPA TYTGSFTQIRDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLPDVYVT CDVCHGARYNRETLEVKFKGKSIADVLDMTVEDAAEFFKAVPPIRDKMEMLVEVGLGYVK VGQQATTLSGGEAQRVKLAKELSRRATGNTLYILDEPTTGLHFEDVRKLLEVLHQLVEQG NTVVVIEHNLDVIKTADWIIDLGPEGGVKGGEIVATGTPEEVVKEPRSYTGKYLAPLLKG ARVEVAQ NT seq 2904 nt NT seq  +upstreamnt  +downstreamnt atgagccttacgaccatttccgtccgcggtgcgcgcgagcacaatctcaaggacgtcgac gtcgacatcccgcgcgacacgttgacggtgatcaccggcctcagcggctcgggcaagtcc agcctcgcgttcgacaccatctatgccgagggacagcgccgctacgtcgaatcgctcagc gcctatgcgcgccagttcctcgaactgatgcagaagcccgacgtcgaccatatcgagggt ctgtcgcccgccatctcgatcgaacagaagacgaccagccgcaacccgcgctcgacggtg gcgaccgtcaccgaaatctacgattacatgcgcctgctctgggcgcgcgtcggcattccc tacagccccgcgaccggcgagccgatcgccgcgcagaccgtcagccagatggtcgaccgc gtcatgaccctgccggaggggacgcgcctctacctgctcgcccccgtcgtgcgcggccgc aagggcgaataccgcaaggaactggcggagtggcagaaggcgggcttcacccgcgtccgc atcgacggccagatccacgagatcgacgaggcgccggcgctcgacaagaagttcaagcac gacatcgaggtcgtggtcgaccggctggtgatccgcgaggatatcgccacccgcctcgcc gaaagcttcgaaaccgcgctcgcgcttgccgacggcctcgcctatgtcgacccggccgat cctgtcgaaccgcacacgcccaagtccgccgtgcttggcgaccacgcccccccgggccgc atcgtgttcagcgagaagttcgcttgccccgtctccggcttcaccatcccggagatcgag ccgcgtctgttctcgttcaacgcgccgcagggcgcctgtccggcgtgcgacggcctgggt gagaaactgctgttcgacgaggacctcgtcgtccccaaccacgacctttccatcaagaag ggtgcggtcgtcccctgggccaagtccaacccgccgagcccttattacatgcaggtgctc ggctccctcgcgcgcgagctcaagttcgacctcgagacgccgtggaaggacctgcaccca gaaatccgggacaagatcctgttcggcaccggcaagacggccgtcacgctgaccttcatc gacggcaagaagagctacgacgtcaagaagccgttcgagggcgtcatcggcaacctcaac cgccgtatgctgcagaccgagagcgcgtggatgcgcgaggaactgtcgcgctaccagtcc agccgcccgtgcgaggtctgccacggcgcgcgcctcaagcccgaggcgctggcggtgaag atcgccggccaggacatcgcgcacgcgacgcatctgtcggtggtcgacgcgctcgccttc ttcaccgccatgccggcgacgctctccgaccagcagcgcgcgatcgccgagcgcatcctg aaagagattgtcgagcgcctcggcttcctcaacaacgtcggcctcgattacctcaacctc gaccgcaccagcggcacgctgtcgggcggcgagagccagcgcatccgcctcgccagccag atcggcagcggcctgtcgggcgtgctctacgtgctcgacgaacccagcatcggcctgcac cagcgcgacaacgacatgctgctcgcgacgctgcgccgcctgcgcgacctcggcaacacc gtgctcgtcgtcgagcatgacgaggatgcgatccgcaccgctgactacgtcatcgacatg gggccgggcgccggcgtccacggcggccaggtcgtggcaaaaggcacgctccccgaactg ctcgccagcgaggggtccgtcaccgccgattacctcaacggcgtgcgcgaggtgcccgtc cccgacgctcgccgcaagggcaacggcaagaagctgaccgtccacaacgcccgcgccaac aacctgaccggcgtcaccgccagcatcccgctcggaaccttcacctgcatcaccggcgtg tcggggtcgggcaagtcgagcttcaccatcgacacgctcttcgccgccgccgcgcgccag ctcaacggcgcgcgcatcctcgccggcaagcacgacaagatcaccgggctccagcacctc gacaaggtgatcgacatcgaccagtcgccgatcggccgcaccccgcgctcgaacccggcc acgtacacgggcagcttcacgcagatccgcgactggttcgccggcctgccggaggcgcag gcgcgcggctacaagcccggccgtttcagcttcaacgtcaagggcggccggtgcgaggcg tgccagggcgacggcgtgctcaagatcgagatgcacttcctccccgacgtctacgtcacc tgcgacgtctgccacggcgcgcgctataatcgcgagacgctggaggtgaagttcaagggc aagagcatcgccgacgtgctcgacatgacggtcgaggatgccgccgaattcttcaaggcc gtgccgccgatccgcgacaagatggagatgctggtcgaagtcggcctcggctacgtcaag gtcggccagcaggcgacgacgctgtccggcggcgaggcgcagcgcgtcaagctcgccaag gaactctcgcgccgcgccaccggcaacacgctctatatcttggacgagcccaccaccggc ctccacttcgaggacgtgcgcaaactgctcgaggtactccaccagttggtcgaacagggc aatacggtcgtggtgatcgaacacaatctcgacgtcatcaagaccgccgactggatcatc gacctgggccccgaaggcggcgtcaagggcggcgagatcgtcgcgacgggcacgccggag gaggtggtcaaggagccgcggagctacaccgggaagtatctggcgccgttgttgaagggc gcgcgcgtggaggtggcgcagtaa

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