KEGG   Sphingomonas sp. FARSPH: DM480_10800
Entry
DM480_10800       CDS       T05685                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K19686  ribonuclease VapC28/30/34/36/42 [EC:3.1.-.-]
Organism
sphf  Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:sphf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sphf02048]
    DM480_10800
Prokaryotic defense system [BR:sphf02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    DM480_10800
SSDB
Motif
Pfam: PIN GvpD_P-loop AvrLm4-7
Other DBs
NCBI-ProteinID: AXJ95925
LinkDB
Position
complement(2266434..2266829)
AA seq 131 aa
MTIFVDASALVAIMEGEAEADEFADAIEQHNDRCYCAVGAWEAMRAIVRLRKTTVEKATS
ALDSVVRTTGLRLVEIGEEESRRAIEAYARYGKGRHRAGLNMGDCFAYACAKTNDARLLY
KGDDFSHTDLA
NT seq 396 nt   +upstreamnt  +downstreamnt
ttgaccatcttcgtcgatgcatcggcccttgttgcgatcatggagggagaagcggaggca
gacgaattcgccgacgcgatcgagcaacacaacgaccgctgctattgcgcggttggcgcg
tgggaagcgatgcgtgcgatcgtccgcttgcgcaaaacaaccgtcgaaaaggcgaccagc
gctctggatagcgtcgtccgtacaaccgggctgcgcctggtggagatcggcgaggaggag
tcgcgacgtgccatcgaggcctatgcccgctatggcaagggtcgccaccgggccgggctc
aacatgggcgattgcttcgcttacgcctgtgccaagacgaacgatgcgcgcctcctctac
aaaggcgacgatttcagccacacggaccttgcctga

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