Sphingomonas sp. FARSPH: DM480_10890
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Entry
DM480_10890 CDS
T05685
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf00061
Fatty acid biosynthesis
sphf00071
Fatty acid degradation
sphf01100
Metabolic pathways
sphf01212
Fatty acid metabolism
sphf02024
Quorum sensing
sphf04146
Peroxisome
Module
sphf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DM480_10890
00071 Fatty acid degradation
DM480_10890
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DM480_10890
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM480_10890
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphf01004
]
DM480_10890
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphf04147
]
DM480_10890
Enzymes [BR:
sphf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DM480_10890
Lipid biosynthesis proteins [BR:
sphf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DM480_10890
Exosome [BR:
sphf04147
]
Exosomal proteins
Exosomal proteins of breast milk
DM480_10890
Exosomal proteins of breast cancer cells
DM480_10890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Zn_ribbon_DnaG
Motif
Other DBs
NCBI-ProteinID:
AXJ97026
UniProt:
A0A345WTM4
LinkDB
All DBs
Position
complement(2281243..2283030)
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AA seq
595 aa
AA seq
DB search
MRTLEYFPNLVAMFFARAREKGDAPFLWAKQNGAWVSTSWADAAHQVASLAAGLKAIGIK
PGDRVMLVSENRPEWCISDLAIMAAGCVTVPTYITNTERDHAHIIADSGACAIIVSTDKL
AKTLLPAVLRSNQGQTVIGIDEMRAPSASIDFHSWRQLIADHPTSADKAAGQATFARGDL
ACIIYTSGTGGAPRGVMQHHGAILHNVNGCCTIISEDFGWEDEVFLSFLPLSHAYEHTGG
QHFPIGLGGQIYYAEGLDKLASNIEEVRPTIMVVVPRLFEVLRTRISKAIEKQGGLGQKL
LGQALAIGARQYEGKLRLIDRPAQVAVNALFKPKISKKFGGRLKAMVSGGAPLNPEIGIF
FQSLGLTFLQGYGQTEAAPVISCNRPSAGLRMDTVGPPLVDTEVRIADDGEILVRGELVM
NGYWRNEAETARVLKDGWLHTGDIGEFDAAGRIKITDRKKDLIINDKGDNVAPQKIEGML
TLQPEIVQAMIYGDRKPYMVALIVPDPEWTQEWCAANGDACNFIRLAENSEYRTAIGHAI
ERVNKDLSVTERVRRFILADGPFAIENEQLTPSLKIRRHIIRHVYGERLDALYRS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgctcgaatatttccccaatttggtcgcgatgttcttcgcccgcgcgcgcgag
aagggcgatgccccgttcctatgggcgaagcagaacggcgcctgggtatcgaccagctgg
gcggacgccgcgcatcaggtcgccagcctcgccgccggcctgaaggcgatcggcatcaag
ccgggcgatcgcgtgatgctggtcagcgagaaccggccggaatggtgcatcagcgacctt
gccatcatggcggcgggctgcgtcaccgtgccgacctacatcaccaacaccgaacgcgat
catgcgcacatcatcgctgattcgggcgcgtgcgcgatcattgtgtcgaccgacaaactg
gccaagacgttgctgcccgcggtgctgcggtcgaaccaggggcagacggtgatcggcatc
gacgagatgcgcgcgccgtccgcgagtatcgacttccacagctggcgccagttgatcgcc
gaccatccgaccagcgccgacaaggccgccgggcaggcgacgttcgcgcgcggcgacctt
gcctgcatcatctataccagcggcaccggcggcgcgccgcgcggcgtgatgcagcatcac
ggcgcgatcctgcacaacgtcaacggctgctgcaccatcatctccgaggatttcggctgg
gaggacgaggtgttcctgtccttcctgcccctttcccacgcttacgaacacaccggcggc
cagcatttcccgatcgggctcggcggccagatctattacgccgagggcctcgacaagctg
gcgagcaacatcgaggaggtgcgcccaacgatcatggtcgtcgtgccgcgcctgttcgag
gtgctgcgcacgcggatcagcaaggcgatcgagaaacaggggggcctggggcagaagttg
ctcggccaggcgctcgcgatcggcgcgcggcaatatgagggcaagctgcggctgatcgac
cgccccgcgcaggtcgcggtcaacgccctgttcaagcccaagatttccaagaagttcggc
ggtcggctgaaggcgatggtgtctggcggcgcgccgctcaacccggaaatcggcatcttc
ttccagagcctcggcctcactttcctgcagggctatggccagacggaggcggcgcccgtc
atctcctgcaaccgcccgtcggcgggcctgcgcatggataccgtcgggccgccgctcgtc
gataccgaggtgcgcatcgccgacgacggcgagatcctggtgcgcggcgagctggtcatg
aacggttattggcgcaacgaggcggaaaccgcgcgcgtgctgaaggacggctggctgcac
accggcgatatcggcgaattcgacgcggccgggcggatcaagatcaccgaccgcaagaag
gacctgatcatcaacgacaagggcgacaatgtcgcgccgcagaagatcgagggtatgctg
acgttgcagccggagatcgtgcaggcgatgatctatggcgaccgcaagccgtatatggtc
gcgctgatcgtgcccgatcccgaatggacgcaggaatggtgcgcggcgaacggcgacgcc
tgcaacttcatccgccttgccgagaacagcgaatatcgcaccgcgatcggccatgcgatc
gaacgggtgaacaaggatctgtcggtcaccgagcgcgtgcgccgcttcatcctcgccgac
ggccccttcgcgatcgagaacgagcagctgacgcccagcctgaaaatccgccgccacatc
atccgtcacgtctatggcgagcggctggacgcgctgtatcgcagctga
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