Sphingomonas sp. FARSPH: DM480_11240
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Entry
DM480_11240 CDS
T05685
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf00010
Glycolysis / Gluconeogenesis
sphf00020
Citrate cycle (TCA cycle)
sphf00260
Glycine, serine and threonine metabolism
sphf00280
Valine, leucine and isoleucine degradation
sphf00310
Lysine degradation
sphf00380
Tryptophan metabolism
sphf00620
Pyruvate metabolism
sphf00630
Glyoxylate and dicarboxylate metabolism
sphf00640
Propanoate metabolism
sphf00670
One carbon pool by folate
sphf00785
Lipoic acid metabolism
sphf01100
Metabolic pathways
sphf01110
Biosynthesis of secondary metabolites
sphf01120
Microbial metabolism in diverse environments
sphf01200
Carbon metabolism
sphf01210
2-Oxocarboxylic acid metabolism
sphf01240
Biosynthesis of cofactors
Module
sphf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sphf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DM480_11240 (lpdA)
00020 Citrate cycle (TCA cycle)
DM480_11240 (lpdA)
00620 Pyruvate metabolism
DM480_11240 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DM480_11240 (lpdA)
00640 Propanoate metabolism
DM480_11240 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DM480_11240 (lpdA)
00280 Valine, leucine and isoleucine degradation
DM480_11240 (lpdA)
00310 Lysine degradation
DM480_11240 (lpdA)
00380 Tryptophan metabolism
DM480_11240 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DM480_11240 (lpdA)
00670 One carbon pool by folate
DM480_11240 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphf04147
]
DM480_11240 (lpdA)
Enzymes [BR:
sphf01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DM480_11240 (lpdA)
Exosome [BR:
sphf04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DM480_11240 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
GIDA
AlaDh_PNT_C
Lys_Orn_oxgnase
FAD_binding_3
Thi4
Amino_oxidase
3HCDH_N
DAO
DUF7759
Motif
Other DBs
NCBI-ProteinID:
AXJ95992
UniProt:
A0A345WQP0
LinkDB
All DBs
Position
2349421..2350821
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AA seq
466 aa
AA seq
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MADEQQYDYDVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKAMLH
ASEYFDAAANGAMAKMGIKVTPELDLDAMHGQRRDAVKQLTGGIEFLFKKNKVEWLKGRA
SFTGKDSVEVAGRTVRARNIVIATGSSVTPLPGVTVDQKMVVDSTGALELAKVPQHLVVI
GGGVIGLELGSVWRRLGAKVTVVEFLDQILPGFDGDVRKEANKIFKKQGLEFKLSTKVTG
VAVDGDTATLTIEPAKGGEAQTIEADAVLVAIGRRPNIDGLNLEAAGVALNGRGQVEIDH
DFRTNVPGVWAIGDVAPGLMLAHKAEDEGIAVAENIAGQHGIVNHDVIPSVVYTMPEFAG
VGLTEEAAKERGEVKVGKFPMMANSRAKTNHEPDGFVKIIADAKTDRVLGVWAIASVAGT
MIAQAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaacagcagtacgactatgacgtcctcgtgatcggcgccggccctggcggc
tatgtcgccgcgatccgcgcggcgcagctggggctgaagaccgcgtgcgcggagagccgc
gagacgctgggcggcacctgcctcaacgtcggctgcatcccgtcgaaggcgatgttgcac
gcgtccgaatatttcgacgccgcggccaatggcgcgatggcgaagatgggcatcaaggtg
acgcccgaactcgacctcgacgcgatgcacggccagcgccgtgatgcggtcaagcagctg
accggcggtatcgagttcctgttcaagaagaacaaggtcgaatggctgaagggccgcgcc
agcttcacgggcaaggacagtgtcgaggtcgccggccgcaccgtgcgcgcgcggaacatc
gtcatcgctacgggctccagtgtcacgccgctacccggcgtcaccgttgaccagaagatg
gtcgtcgattcgaccggcgcgctcgaactcgccaaggtgccgcagcatctcgtcgtcatc
ggcggcggcgtcatcggcctggaactcggcagcgtgtggcgccgcctgggtgcgaaggtg
accgtcgtcgaattcctcgaccagatcctgcccggcttcgacggcgacgtccgcaaggaa
gccaacaagatcttcaagaagcagggcctcgagttcaagctgtcgaccaaggtcaccggc
gtcgccgtcgacggcgacaccgcgacgctgacgatcgaacccgccaagggtggcgaggcg
cagacgatcgaggcggatgcggtgctggtcgcgatcggccgcaggccgaacatcgacggt
ctcaacctcgaggcggccggcgtcgcgctgaatgggcgcgggcaagtggagatcgaccac
gacttccgcaccaacgtccccggcgtctgggcaatcggcgacgtcgcgcccggcctgatg
ctcgcgcacaaggcggaggacgaaggcatcgcggttgcggagaacatcgcgggccagcac
ggcatcgtgaaccacgacgtcatcccctcggtcgtctacacgatgcccgaattcgccggc
gtcggcctgaccgaggaagcggcaaaggaacgcggcgaggtcaaggtcggcaagttcccg
atgatggcgaacagccgggccaagaccaaccacgagcccgacggcttcgtgaagatcatc
gcggatgccaagaccgaccgcgtgctcggcgtgtgggcgatcgcctcggtcgcgggtacg
atgatcgcacaggcggcgcaggcgatggaattcggcgcgacgagcgaggacatcgcctac
acctgccacgcgcatccgacgcattcggaggcgatcaaggaagccgcgatggcggtgacc
ggcaagccgatccacatctga
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