Sphingomonas sp. FARSPH: DM480_11280
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Entry
DM480_11280 CDS
T05685
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM480_11280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphf03400
]
DM480_11280
Enzymes [BR:
sphf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DM480_11280
DNA repair and recombination proteins [BR:
sphf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM480_11280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AXJ95998
UniProt:
A0A345WQP6
LinkDB
All DBs
Position
complement(2363659..2364291)
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AA seq
210 aa
AA seq
DB search
MGLSEEQLRADLDALAAREPAFAAGLARVGYPAPRIRARGYDTLLRTIIGQQVSVQSANA
VYRKLETLVGNPSDPHTILAASDETLRAAGLSRQKASYARSLAEEVTSGRLDLDNLPADD
EEAIAQLVRVKGIGRWSAEIYLLFAEGRTDIWPAGDLAVQIEVGRLLGHDARPSEKMVRA
LAESWRPHRGALAIFTWHHYGAGPDDKAPV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggggctgagcgaggaacagctgcgcgccgatctcgacgcgctcgcggcgcgcgaaccc
gccttcgccgccgggctggcgcgggtcggctaccccgcgccacgcatccgtgcgcgcggg
tacgacacgttgctgcgcacgatcatcggccagcaggtcagcgtccagtcggcgaacgcg
gtctatcgcaagctggagacgctggtcggcaaccccagcgacccgcacacgatcctggcg
gccagcgacgagacgctgcgcgcggcgggcctgtcgcggcagaaggcgtcctacgcgcgc
agcctcgccgaagaggtgacgagcgggcggctcgacctcgacaatctgcccgccgacgac
gaagaagcgatcgcgcagctcgtccgcgtcaagggcatcggccgctggtcggcggaaatc
tacctgctgttcgccgaggggcgcaccgacatctggcccgccggcgacctcgccgtccag
atcgaggtcggccgcctgctcggccacgacgcacgcccctccgagaaaatggtgcgcgca
ctcgccgaatcctggcgcccgcaccgcggcgcactcgccatcttcacgtggcaccattac
ggcgccggccccgacgacaaggcgccggtctga
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