Sphingomonas sp. FARSPH: DM480_11450
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Entry
DM480_11450 CDS
T05685
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf00470
D-Amino acid metabolism
sphf00550
Peptidoglycan biosynthesis
sphf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DM480_11450 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DM480_11450 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphf01011
]
DM480_11450 (murD)
Enzymes [BR:
sphf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DM480_11450 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sphf01011
]
Precursor biosynthesis
Amino acid ligase
DM480_11450 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
2-Hacid_dh_C
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AXJ96027
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Position
2397006..2398301
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AA seq
431 aa
AA seq
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MILSNAWKGQRYAVLGLARSGMATVRALAAAGAHVVAWDSDPAARERAEAIDGVIVHDPA
LLDLTGAAGLVVSPGVPLNTHPLVAQARAAGVPIIGDIELFAQARAELPPHKVVGITGTN
GKSTTTALVHHILKTAGVPTLMGGNIGLPILEQEPLPAGGVYVLELSSYQIDLTQTLDCD
VAVLLNITPDHLDRYDGFEGYAASKARLFAMQSAEHDVVIGVGDQASDRIAESLSARNEH
VVVVGRDPVASAADWPSLQGPHNAQNAVAAMIVGAKLNVAVDAIEAALCTFTGLPHRMER
VAIRNGVTFVDDSKATNPESAAPALGAFERIHWIVGGKRKGNDLDACAPYFDRVVAAYTI
GEAAQLFADILTPKVPHVEQAGDLAAAVRHAAAAARPGETVLLSPACASFDQFRDYEARG
AAFRAAVEALD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgatcctttccaacgcctggaagggccaacgctacgccgtactcggcctcgcgcgatcc
ggcatggcgacggtacgcgcgctcgccgcggcgggcgcgcatgtcgtggcgtgggacagc
gatccggcggcgcgggagcgggcagaggcgatcgatggcgtgatcgtccacgatccggcc
ctgctcgacctcactggcgcggcggggctggtggtgtcgccgggcgtgccgctcaacacg
catccgctggtcgcgcaggcgcgcgcggcgggggtgccgattatcggcgatatcgaattg
ttcgcgcaggcgcgggccgaactgccgccgcacaaggtcgtcggcatcaccggcaccaac
ggcaaatcgacgaccaccgcgctcgtccaccatatcctcaagaccgcgggcgtaccgacg
ctgatgggcggcaacatcggcctgccgatcctggagcaggagccgctgccggcgggcggg
gtctatgtgctggagctgtctagctaccagatcgacctgacgcagacgctcgattgcgat
gtggcggtgctgctcaacatcacgcccgatcacctcgaccggtacgatgggtttgaggga
tatgccgcatccaaagcacggctgtttgcgatgcagtctgccgaacacgacgttgtgatc
ggtgttggcgatcaggcgtcggatcgcattgccgagagtttgtccgcgcgtaacgagcac
gtcgtggtggtgggcagagatcccgtggccagcgccgccgactggccttcactacagggg
ccgcacaacgcccagaatgccgtggcggcgatgatcgttggcgcgaaattgaacgtcgcg
gtggacgcgattgaagcggcactctgcaccttcaccggcctcccccaccgcatggagcgg
gtcgcgatacgcaacggcgtcaccttcgtcgacgacagcaaggcgaccaatccggaaagc
gccgcgccggcgctcggtgcgttcgaacgcatccactggatcgtcggcggtaagcgcaaa
gggaacgacctcgacgcctgcgcaccctatttcgatcgggtcgtcgcggcctatacgatc
ggcgaggcggcccagcttttcgccgacatcctgacccccaaggtcccccacgtcgagcag
gccggcgacctcgccgccgccgtccgccacgctgcggccgccgccaggcccggagaaacc
gtgctgttgtcgccagcctgtgctagcttcgaccagttccgcgactacgaggcgcgcggg
gcggcgttccgggcggcggtggaggcgctggattga
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