Sphingomonas sp. FARSPH: DM480_12230
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Entry
DM480_12230 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_12230
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_12230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
TrbC_Ftype
Motif
Other DBs
NCBI-ProteinID:
AXJ96153
UniProt:
A0A345WR51
LinkDB
All DBs
Position
complement(2551003..2553144)
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AA seq
713 aa
AA seq
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MTKFALLAGAAVLALPALPAAAQTDAPGTPAQRDQTRDIIVTAPIDQSERDVLQGTTVLS
GEALTRELRPTIGETLARQPGVSATSFGPSASRPILRGFQGDRVRVLTDGIGAIDVSNTS
VDHAVIIDPLLAERVEVLRGPSALLFGSSAVGGVVNVIDTRIPRTLPKDGYRVNGIANYG
SAANERSAGMAGDVAVGDHLVLHADGSYLKSDDLRTGHGYLLSSAARRAALSQVGLPQPG
TDEPIDFAASAALRDRLPNSAAETWTAGAGASIITDTGNLGISYSHYDSLYGVPIRYATQ
VGQEQEAPRLSVVQNRVDLRGEVRTGGGFLDRIRIRAGQATYRHFELGADGSVGTAFYNN
GLEARLELVQANRGGWQGASGVQYFNRQFDVKGDEAFLPKNETNQTGFFTLQQYASGPFR
AEGGLRYEVSDLAARTPAGDQRFFAGKRHFDAVSGSLGASYALTDTIRVGLNGSRTERAP
SAEELFANGAHAGTQAYELGNPNFRLEKSWGLEATLHAHGTGFSFDASAYYNWFTNYISE
NQVDQAACAAAAAPSGRDVDLPCFQYQQRDARYWGFEADGSVKLAQIGGYAINADLLGDY
VRATIVDQGPVPRIPPARLLGGIEVQGDRLSARVEAEHAFAQGRIAAFETRTPAYTMVNA
SVSLKPFGPDSRTSLLLSANNVFDVVARRHSSFLKDFAPLAGRDLRATLRFGL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattcgccctgctggccggcgcggccgtgctcgccctgcccgcgcttcccgcc
gccgcacaaacggacgcgcccggcacgcccgcgcagcgcgaccagacccgcgacatcatc
gttacggcaccgatcgaccagagcgagcgcgacgtgctgcagggcacgaccgtgctgtcg
ggcgaggcgctgacccgcgaactgcgcccgacgatcggcgagacgctggcgcgccagccc
ggcgtgtcggccacctcgttcggccccagcgcgtcgcggccgatcctgcgcggcttccag
ggcgaccgcgttcgggtgctgaccgacggtatcggcgcgatcgatgtcagcaacaccagc
gtcgaccatgccgtcatcatcgacccgctgctcgccgaacgggtcgaggtgctgcgcggg
ccgtcggcgctgttgttcggatcgtccgcggtcggcggcgtcgtcaacgtcatcgacacg
cgcatcccgcgcaccctgcccaaggacggctatcgcgtgaacggcatcgccaattacggg
tcggcggcgaacgagcgctccgccggcatggcgggcgacgtcgcggtcggcgaccatctc
gtcctccacgccgacggatcgtatctgaagtcggacgacctgcgcacgggccacggttat
ctgctgtcctcggcggcgcggcgcgccgcgctcagccaggtcggcctgccgcaaccgggc
accgacgagccgatcgacttcgccgcgtccgccgccttgcgcgatcgcctgcccaattcg
gcggcggaaacgtggaccgcgggcgccggcgcgtcgatcatcaccgacaccggcaacctc
ggcatcagctacagccattacgacagcctgtacggcgtgccgatccgctacgcgacccag
gtcggccaggagcaggaggcgccgcgcctgtccgtcgtccagaaccgcgtcgacctgcgc
ggcgaggtgcggaccggcggcggcttcctcgaccgtatccgcatccgcgccggccaggcg
acctatcgccacttcgagcttggcgcagacggcagcgtcggcaccgctttctacaacaac
gggctggaggcgcggctggaactggtgcaggcaaaccgcggcggctggcagggggcaagc
ggcgtccagtatttcaaccgccagttcgacgtgaagggcgacgaggcgttcctgccgaag
aacgagaccaaccagaccggcttcttcacgctgcagcaatatgccagcggcccgttccgc
gccgaaggcggcctgcgctacgaggtcagcgaccttgccgcgcgcacgcccgccggcgac
cagcgtttctttgcgggcaagcggcatttcgacgcggtatcgggctcgcttggcgcgtcc
tatgcgctgaccgacacgatccgcgtcggcctcaacggatcgcgcaccgagcgcgcaccg
tcggcagaggaattgttcgccaatggcgcgcacgctggcacgcaggcgtacgaactgggc
aatccgaacttccggctggagaaatcctgggggttggaggcgacgctgcatgcgcatggc
accggcttcagcttcgatgcgtcggcctattacaactggttcaccaactatatctcggag
aaccaggtcgatcaggcagcctgcgccgccgcggccgcgccgtcgggccgtgacgtcgac
ctcccctgcttccagtatcagcagcgcgacgcccgttattgggggttcgaggcggacggg
tcggtcaagctcgcccagatcggcggctatgcgatcaacgccgacctgctcggcgattac
gtccgcgcgacgatcgtcgaccagggtcccgtgccgcgcatcccgccggcccgtctgctt
ggcgggatcgaggtgcagggcgaccggctgagcgcgcgcgtcgaagcggaacatgccttc
gcgcaggggcgtatcgcggcgttcgagacgcgcacgccggcctatacgatggttaatgcg
tcggtgtcgctgaagccgttcggaccggacagccgcaccagcctgctgctgtcggcgaac
aacgtcttcgacgtcgtcgcgcgccggcattccagcttcctcaaggacttcgcgccgctt
gccggccgcgacctgcgcgcgacgctgcggttcggattgtag
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