Sphingomonas sp. FARSPH: DM480_12575
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Entry
DM480_12575 CDS
T05685
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphf03400
]
DM480_12575
DNA repair and recombination proteins [BR:
sphf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DM480_12575
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
RecA
AAA_22
AAA_30
Glyco_hydro2_C5
NTPase_1
AAA
DUF7125
NACHT
nSTAND3
AAA_5
MeaB
SLFN-g3_helicase
AAA_29
AAA_14
CbiA
ATPase_2
NPHP3_N
Rad51
Motif
Other DBs
NCBI-ProteinID:
AXJ96208
UniProt:
A0A345WRA6
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All DBs
Position
2634338..2635708
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AA seq
456 aa
AA seq
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MAKPQKRYVCQACGSVSHRWAGQCGDCAEWNTLVEEAGAVVTPFQAKHNLQTGGRAVQLV
GLDAEIALPDRMATGIAELDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAAKLASAGRA
VAYVSGEEAADQVRLRARRLGLGNAPVQLAAATSTRDILTTLSLGAPPALLVIDSIQTMH
SDLIEGAPGTVSQVRASAQELIRFAKERGTALVLVGHVTKDGSIAGPRVLEHMVDTVLAF
EGERSHQYRILRAIKNRFGGTDEIGVFSMQSEGLSEVANPSALFLTSRDESVTGATVFPA
LEGTRPVLVEIQALVVRLASGATPRRSVVGWDSGRLAMILAVLEARCGLFFSSAEVYLNV
AGGYRVQDPAADLAVAAALVSALSERPVAVDAVAFGEIALSGEIRPVAHSALRLKEAGKL
GFERALVPTAMAKEESPLRLTGFRTLAQFVDHMLGR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaccccagaaacgctacgtctgtcaggcctgcgggtcggtgtcgcaccgctgg
gcggggcagtgcggcgattgtgccgagtggaacacgcttgtcgaggaggcgggagcggtc
gtgacgccgttccaggcgaagcacaacctgcagaccggggggcgggcggtgcagctggtc
gggctggacgcggagatcgcgctgcccgaccggatggcgacgggtatcgccgaactcgac
cgtgcgctgggcggcggcttcgtggaagggtccgcgacgctgatcggcggggatccgggt
atcggcaagtcgacgttgctgctgcaggcggcggcgaagctggcgagcgcgggtcgggcc
gtggcctatgtttccggcgaggaggcggcggatcaggtgcggctgcgcgcgcgccggttg
ggattgggcaacgcgccggtgcagctggcggcggctacgtcgacgcgcgatatcctgacg
acgctgtcgctgggcgcgccgcccgcattgctggtgatcgattcgatccagacgatgcat
tccgacctgatcgagggtgcacccggcacggtcagccaggtgcgcgcttccgcgcaggag
ctgatccgtttcgccaaggaacgcggcaccgcgctggtcctcgtcggccatgtcaccaag
gacggcagcatcgcggggccgcgcgtgctggagcatatggtcgacaccgtgctcgccttc
gagggcgagcgcagccaccagtaccgcatcctgcgcgcgatcaagaatcggttcggcggc
accgacgagatcggcgtcttctcgatgcagagcgaggggctgagcgaggtcgccaacccc
tccgccctgttcctgaccagccgcgacgagagcgtgacgggcgccaccgtctttcccgcg
ctggaggggacgcggccggtgttggtcgaaatccaggcgctggtggtgcgcctcgccagc
ggggcgacgccgcggcgatcggtggtcggctgggattcgggccggctggcgatgatcctg
gcggtgctggaggcgcggtgcggcctgttcttctcgtcggcggaagtctatctcaacgtc
gcgggcgggtaccgggtgcaggacccggccgcggacctcgccgtcgccgcggccttggtg
tcggcgctgtcggaacggcccgtcgcagtcgacgcggtcgcgttcggcgagatcgcgctg
tcgggcgaaatccgccccgtcgcgcacagcgccctgcgcctcaaggaggcgggcaagctc
ggtttcgagcgtgcgctggtcccgaccgcgatggcgaaggaggaaagcccgctgcgcctc
acgggcttccgcacgctggcgcagttcgtcgatcatatgctggggcggtag
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