Sphingomonas sp. FARSPH: DM480_12715
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Entry
DM480_12715 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_12715
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_12715
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CamS
Motif
Other DBs
NCBI-ProteinID:
AXJ96229
LinkDB
All DBs
Position
complement(2657564..2660359)
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AA seq
931 aa
AA seq
DB search
MRNWGYLLAATACAAIVAPAGAQGLRGTLPSGKEADKNADKASADAPSKNTSDIIVTATR
RSERLSNVPIAVSAYGTAALQNSGATDIRQMAQLAPSLIVSSTGSEANATARLRGIGTVG
DNPGLESSVAVFIDGVYRSRTGSGLNDLGEVDRIEVLRGPQGTLSGRNSSAGAISIYTKY
PSFDFGGYGEASYGNYNAVRLAGALTGPIIKDTLAFRLDGVFGKRDGFYHDVVNNTDYND
RNRYFVRGQLFFKPSSTFSVRLIGDYTWRNEKCCGAVYIDTREKLDPTPGVPGDFTINPN
GNRIVQILQSLGGVLPSDGNPYNRQIANTPGRAYANVTKDYGGSARIGWNIGQTQLISIT
AYREYKSGGAADIDYSNVDIGYRPDDGNAYRQFHTFTQETRLSGGLFNNKLDWLIGGYYA
HEDLIVADNLKFGSQYGAFAACRIVATINPLAALRDPTKPGCLGTTPLAALGGATGRQAV
GAGLGAAAAFLLPGIDRLSTVNTVGSIRDTYDQTSENYAFFTHNIFRITDTLSITGGLRY
TNEHKSLNASFNNNNTVCPAQQAALSPLLASAAVPAALKPLIGGIITLTCTGNSTSALTG
VPIKDSIREGQFTGTSVLSWKPVPSTLLYASYARGYKAGGYNLDRSDLSATVFATPTASS
ASNLRFDPETVQAFEVGVKYATPKFTANLAAFRSAFKNFQLNTFNGTNYIVQNIGSCSTS
LNGADQDDSASTGACTGKVKAGVVTQGFELEAGAYPTPDLAFNLGYTYAHTQYRNNLVGS
DSGEALNNALFLLPGSQMSNAPRHTVTSSATFTPRVGTNGLTALFYVDGRMTSDYNTGSD
LFAEKIQDGYVLVNARIGIRGRDQHWAIEFWGQNILDTNYQQVAFAAPFQGAGSLSQVQR
FGSPTYAAGNALFASFLAEPRTYGVTLRSRF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaattgggggtatctgctggccgcaacggcatgcgcggcaatcgttgcaccggcg
ggcgcgcaggggctgcgcggcacgttgccgtcgggcaaggaagcggacaagaatgccgac
aaggcgagcgcggacgcgccgtcgaagaacacgtccgacatcatcgtcaccgcgacgcgc
cgttccgaacgcctgtcgaacgtgccgatcgcggtcagcgcctatggcaccgccgcgctg
cagaattcgggcgcgaccgacatccgccagatggcgcagctcgcgccgtcgctgatcgtc
tcgtcgaccggatcggaagccaatgccacggcgcggctgcgcggcatcggcacggtcggc
gacaaccctggcctcgaaagctcagtcgcggtgttcatcgacggcgtctatcgcagccgc
acgggctcgggcctcaacgatctgggcgaggtcgaccggatcgaggtgctgcgcgggccg
cagggcacgctgtcggggcgcaattcgtcggcgggcgcgatcagcatctacaccaaatat
ccctcgttcgacttcggcggctatggcgaggcgagctacggcaattacaacgccgtccgt
ctggcgggtgcactgaccggaccgatcatcaaggacacgctcgcctttcgcctcgacggc
gtgttcggcaagcgtgacggcttctaccacgatgtcgtcaacaacaccgactataacgac
cgcaaccgatacttcgtccgcggccagctgttcttcaagccgtcgtcgaccttctcggtc
cgcctgatcggcgattacacctggcgcaacgaaaagtgctgcggcgcggtctatatcgac
acgcgcgagaagctcgacccgacgcccggcgtccccggcgacttcacgatcaacccgaac
ggcaaccgcatcgtccagatcctgcagagcctgggcggcgtgctgccgagcgacggcaat
ccgtacaaccgccagatcgccaacacgccgggccgcgcctatgccaacgtgacgaaggat
tacggcggctcggcacgcatcggctggaacatcggccagacgcagctcatctcgatcacc
gcctatcgcgaatacaagtcgggcggcgcggcggacatcgattatagcaacgtcgacatc
ggctatcgccccgacgacggcaatgcctatcgccagttccacaccttcacgcaggaaacg
cggctcagcggcggtctgttcaataacaaactcgactggctgatcggcggctattacgcg
cacgaggacctgatcgtcgccgacaacctgaagttcggatcgcaatatggcgccttcgcg
gcgtgccgcatcgtcgccacgatcaacccgctcgccgcgctgcgtgatccgaccaagccg
ggctgtctcggcaccaccccgctcgccgcgctgggcggggcgaccggccgacaggcggtc
ggcgcggggctcggcgctgcggcggcgttcctcttgccgggcatcgaccggctgagcacg
gtcaacaccgtcggctcgatccgcgacacctacgaccagacgagcgaaaactacgccttt
ttcacgcacaacatcttccgcatcacggatacgctgagcatcaccggcggcctgcgctac
accaacgagcacaagtcgttgaacgccagcttcaacaacaacaataccgtctgcccggcg
cagcaggccgcgctcagcccgctgctcgccagcgcggcggtgcccgcggcgctcaagccg
ctgatcggcgggatcatcacgctgacctgcacgggcaattcgacgtccgcgctgaccggc
gtcccgatcaaggactcgatccgcgagggccagttcaccggcacgtcggtgctgtcgtgg
aagcccgtgcccagcacgttgctctacgcctcctacgcgcgcgggtataaagcgggcggc
tataacctcgaccggtccgatctgtcggcgaccgtgttcgcgacgccgaccgcgtcgagc
gccagcaacctgcgcttcgacccggaaacggtgcaggcgttcgaggtcggcgtgaaatat
gcgacgccgaaattcaccgcgaacctcgccgccttccgttcggcgttcaagaacttccag
ctcaacacgttcaacggcaccaactatatcgtccagaacatcggatcgtgcagcacgtcg
ctgaacggcgcggaccaggacgattccgcctccaccggcgcctgcacgggcaaggtcaag
gcgggcgtcgtcacgcaggggttcgagctggaggcgggtgcctatccgacccccgatctc
gccttcaatctcggctacacctacgcccacacgcaatatcgtaacaatctggtcggcagc
gattcgggggaggcgctcaacaacgcgctctttctgctgccgggcagccagatgtcgaac
gcgccgcgtcacacggtgacgtcctcggcgacgttcacgccgcgggtcggcacgaacggt
ctgaccgccctgttctacgtcgatggccgcatgaccagcgattacaacaccggctccgac
ctgttcgccgagaagatccaggacggctacgtcctcgtcaatgcgcgcatcggtatccgc
ggccgcgatcagcattgggcgatcgagttctggggacagaatattctcgataccaactac
caacaggtcgcctttgccgcaccgttccagggcgcgggcagcctgtcgcaggtccagcgt
ttcggttcgcctacctatgcggccggcaacgcgctcttcgcctcgttcctcgccgaaccg
cggacctatggcgtgacgctgcgctcgcgcttctga
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