Sphingomonas sp. FARSPH: DM480_12740
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Entry
DM480_12740 CDS
T05685
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphf03009
]
DM480_12740
Enzymes [BR:
sphf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
DM480_12740
Ribosome biogenesis [BR:
sphf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DM480_12740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AXJ96234
LinkDB
All DBs
Position
complement(2667168..2667707)
Genome browser
AA seq
179 aa
AA seq
DB search
MTLVLFNKPYDVLSQFTDRGSPTTRATLSDYVAVPNVYPAGRLDRDSEGLLLLTDDGRLQ
ARIADPKFKLSKTYLVQVEGEPDEAALAALRHGVMLKDGPTRPADVTQIDDPALWPRDPP
IRYRASIPDRWLRLTIREGRNRQVRRMTAAVGHPTLRLIRWQVGDWTLDGLAPGAWRIA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgtcctgttcaacaagccctatgacgtgctcagccagttcaccgatcgcgga
tcgccgacgacgcgcgcgaccttgtccgattacgtcgcggtgcccaacgtctatcccgcc
gggcggctcgaccgcgacagcgagggattgctgctgctgaccgacgacggacggctgcag
gcgcggatcgccgatccgaagttcaagctgtccaagacctatctggtgcaggtggagggg
gagcccgacgaagcggcgctcgccgcgctgcgacacggcgtgatgctgaaggacgggccg
acgcgtcccgccgacgtgacgcagatcgacgatccggccctgtggccgcgcgatccgccg
atccgttatcgcgcgagcattcccgaccgctggctgcgcctgaccatccgcgaaggccgc
aaccggcaggtgcggcggatgaccgcggcggtcggccacccgacactgcggctgatccgc
tggcaggtcggcgactggacgctcgacggtcttgcgccgggcgcatggcggatcgcgtga
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