Sphingomonas sp. FARSPH: DM480_12825
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Entry
DM480_12825 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_12825
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_12825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF6778
Motif
Other DBs
NCBI-ProteinID:
AXJ96251
LinkDB
All DBs
Position
complement(2690137..2693151)
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AA seq
1004 aa
AA seq
DB search
MTLSFRSHLLTTTLVVGAALIATPALAQTAPATQETQQKTDDPNAAPPAQEGGDIVVTGT
LISNPNLVSSSPVNTVSENELTLRNTNNVEQIIRELPGAVPGIGSAVNNGTGGFATINLR
NLGSQRNLVLLDGDRIVPAAAGGTVDLNNIPTALIQRVDVLTGGASTTYGADAVSGVANF
ITKKNFAGMEAQASQQITERGDANYFTADLTIGANFDDGRGNAVLSLGYQEADPLYQGSR
DISIYGIGSGNGVASGSSTTGVPTAINFTNAQAALAGLSTGLVQVNSGGTALVPFYSGFN
FNPYNIFVTPFKRYNMFAQANYEVNDNLEVYSRGMFSKNTIQQIIAPSGIFGEMLTIPGN
NPYLPATLRDQLCLANGVALGATCTGATALNLPEVYRRSVELGPRVSTYTTTMFDYKAGL
RLRFSEHVKLDVSGAYGESDLNQTQSGYVLRSRVQQALNANNTTTCTVTTNNCVPLNLFG
PAGSITSDQANFLNGKSTIQIHTALSQAKAVLNGDFGTTSPFANEPIAFAAGGEYRKYTY
TRTPDAYALSPGELGGAGGAVLPFAGSYDVREAFGEIIAPLVADKPFFHSLTLEAGVRYS
NYKVQAANNPTFSATTYKFGGSFEPVEEIKFRGNYQRAVRAPNIAELFSPVTTGLDNLSP
GLDPCVGTKPLASANLAQACINQGAPASSIGTILEPQSGQPNVTGGGNPNILPEKADTYT
IGVVIQPRGIVPGLSVAVDYFNIKVNNAITAATPADILTQCFGTNPAAITAAQAASAACT
SIRRSATSGRLSGSSATVAGLPQPLTNRGRLRTDGIDLNANYARDFGDVGLNLSFQGTWT
AHNYFRASETAYDRDCVGYYSTSCSSIQPEFQWNQRTSLTFGPGTFSVLWRHIGKVRYEA
LAPDATARQVTTPLFNGVVTGPTPLAGGTYNFNEIKAYNYIDLAAQVEVNEHLTFTMGVR
NLFDKKPPLVGSSAGSTAFNSGNTYPSTYDVLGRLFTVSGKLRF
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgacgctaagctttcgttcccatctcctgaccacgacgctcgtcgtgggcgcagcattg
atcgcgacgcccgcgctggcgcagaccgcgccggccacgcaggaaacgcagcagaagacg
gacgacccgaacgccgcaccgccagcccaggaaggcggcgacatcgtcgttaccggtacg
ctgatcagcaatccgaacctcgtctcgtcgagcccggtcaataccgtctccgagaacgaa
ctgacgctgcgcaacaccaacaacgtcgaacagatcatccgcgaactgccgggtgcggtt
ccgggcatcggttcggccgtgaacaacggcaccggcggtttcgcgacgatcaacctccgc
aacctcggctcgcagcgcaacctggtgctgctcgacggagatcgcatcgttcccgcggcc
gctggcggcaccgtcgacctcaacaacatcccgaccgcgctgatccagcgcgtcgacgtg
ctgaccggtggcgcctcgaccacctacggcgcggacgcggtgtcgggtgtcgcgaacttc
atcaccaagaagaatttcgccggcatggaggcgcaggccagccagcagatcaccgagcgc
ggtgacgccaactatttcaccgccgacctgaccatcggcgcgaatttcgacgacggccgc
ggcaatgcggtgctgagcctcggctatcaggaagcggatcccctgtatcagggcagccgc
gacatctcgatctacggcatcgggtcgggcaatggcgtcgcatcgggctcgtcgacgacg
ggcgtgccgaccgcgatcaacttcaccaacgcgcaggcggcgctcgccggcttgtcgacc
ggcctcgtccaggtcaattccggcggcacggcactggtgccgttctacagcggcttcaac
ttcaacccgtacaacatcttcgtaacgccgtttaagcgttacaacatgttcgcgcaggcg
aactacgaggtgaacgacaacctcgaagtctacagccgcggcatgttctcgaagaacacg
atccagcagatcatcgcgccgtcgggcatcttcggcgaaatgctgaccatcccgggcaac
aatccgtatctgcctgcgacgctgcgcgatcagctctgcctcgccaacggggtagcgctt
ggcgcgacctgcaccggcgcgaccgcgctgaacctgccggaagtctatcgccggtcggtc
gaactcgggccgcgcgtatcgacctataccacgaccatgttcgactataaggcgggcctg
cgcctgcgcttctccgaacacgtcaagctcgacgtctccggcgcctatggcgaaagcgac
ctcaaccagacgcagtcaggttacgtgctgcgcagccgcgtccagcaggcgctgaacgcg
aacaacacgacgacctgcaccgtcaccaccaacaattgcgtgccgctcaacctgttcggg
ccggccggctcgatcaccagcgaccaggcgaacttcctgaacggcaagagcaccatccag
atccacaccgcgctgtcgcaggcaaaggcggtgctgaacggcgactttggcacgacctcg
cccttcgccaacgaaccgatcgcgttcgcggccggcggcgaatatcgcaagtacacctat
acccgcacgcccgacgcctatgcgctgtcgccgggcgagctgggcggtgccggcggtgcg
gtgctgcccttcgcgggcagctacgacgtgcgtgaagcgttcggcgaaatcatcgcgccg
ctcgtcgccgacaagccgttcttccactcgctgacgctcgaggccggcgtccgctactcg
aactacaaggttcaggcagcgaacaatccgaccttctcggcaacgacctacaagttcggc
ggcagcttcgagcccgttgaggaaatcaagttccgcggcaactaccagcgcgcggttcgg
gcgccgaacatcgccgagctgttctcgccggtgaccacgggcctcgacaatctttcgccg
ggtctcgacccctgcgtgggcacgaagccactggcgagcgccaatctggcacaggcatgc
atcaaccagggcgcgccggcgtccagcatcggcacgatcctcgaaccgcagtcgggccag
cccaacgtgaccggcggcggcaatccgaacatcctgccggaaaaggccgatacctacacg
ataggcgtcgtgatccagccgcgcggcatcgtcccgggcctcagcgtcgcggtcgattat
ttcaacatcaaggtgaacaacgcgatcaccgcggcgacgccggccgacatcctgacgcag
tgtttcggcaccaatccggcggcgatcactgcggcccaggccgcgtcggccgcctgcacc
agcatacgccgcagcgcgaccagcggtcgcctgagcggatcgagcgcgacggtcgcgggc
ctgccgcagccgctcaccaaccgtggccgtctgcggaccgatggcatcgatctcaacgcg
aactacgcgcgtgacttcggcgatgtcgggctgaacctcagcttccagggcacctggacc
gcgcacaactacttccgtgcgtcggaaaccgcctacgatcgcgactgcgtcggctattac
agcaccagctgctcgtcgatccagccggagttccagtggaaccagcggaccagcctgacc
ttcgggccgggcaccttctcggtactgtggcgtcatatcggcaaggtccgttacgaggcg
ctggccccggatgcgaccgcgcgtcaggtgacgacgccgctgttcaacggcgtggtgacg
ggtccgaccccgctcgccggtggcacttacaacttcaacgagatcaaggcgtacaactac
atcgatctcgccgcgcaggtggaggtgaacgagcacctgacgttcacgatgggcgtccgc
aacctgttcgacaagaagccgccgctggtgggttcgtcggccggttcgaccgcctttaac
agcggcaacacctatccgtcgacctacgacgtgctgggtcgcctgttcaccgtgtcgggc
aagctgcgcttctaa
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integrated database retrieval system
