Sphingomonas sp. FARSPH: DM480_13165
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Entry
DM480_13165 CDS
T05685
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM480_13165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphf03032
]
DM480_13165
Enzymes [BR:
sphf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DM480_13165
DNA replication proteins [BR:
sphf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DM480_13165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
AAA_16
AAA
ATPase
NACHT
AAA_22
nSTAND3
RuvB_N
NB-ARC
IstB_IS21
DUF5767
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXJ96305
LinkDB
All DBs
Position
2765215..2766705
Genome browser
AA seq
496 aa
AA seq
DB search
MATLAFPTPTAAAEPMHLPRNVEAEAAMLGAMMIDNRLADDLVDRLEPAHFYEPVHGRIF
AAIKTLRSNDMLATPVTLRPMFEADEGMKELGGPAYLAQLTGSGAGLIGARQFATQIYDL
AMLRALVSVGRTLVERAMDTSEEVNPRAQIEAAEEELYKVAGDGGVENSVKSFAQATTMA
VKMAERALNSGGNLSGVTTGLDSVNSKIGGMHHSDLMILAGRPGMGKTSLATNIAFNAAR
RWMRDMADGISPSESVGAKVAFFSLEMSADQLATRILAEQSGISSENLRMGKISKAEFGQ
LAAAAAELENLPFFIDDTGGLSISALHTRVRRLQRRHNNQIGLVVVDYLQLLTSGKGGNE
NRVQEISEISRGLKTLAKDMNVPVLALSQLSRAVESREDKRPMLSDLRESGSIEQDADMV
WFVFREDYYTAQREPKRPMEGDDAKIFEDHAKWAADMERVYGLAELIVAKQRHGATGKVV
LKFDPTITRFTDYAGY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctggcattccccactccgacggccgcggccgaaccgatgcatctgccgcgc
aacgtcgaggcggaagccgcgatgctgggcgcgatgatgatcgacaaccggctggccgac
gatctggtcgaccggctggaaccggcccatttctacgagcccgtccacggccgcatcttc
gccgcgataaagacgttgcgatccaacgatatgctggcgactcctgtcacgctgcgtccg
atgttcgaggcggatgaggggatgaaggagctgggcggaccggcctacctcgcgcagctg
accggatcgggcgccggcctgatcggggcgcggcagttcgcgacgcagatttacgatctg
gcgatgctgcgcgcgctcgtcagcgtcgggcgaaccttggtcgaacgcgcgatggatacc
tccgaagaggtcaatccgcgcgctcagatcgaggcggcggaagaggaattgtacaaggtc
gcgggcgacggcggggtcgagaattcggtcaagagcttcgcgcaggcgacgacgatggcg
gtcaagatggccgaacgcgcgctcaattcgggcggcaacctgtcgggtgtcaccaccggg
ctcgattcggtcaattccaagatcggcggcatgcatcattccgatctgatgattctcgcc
ggccgtccgggcatgggcaagacgtcgctggcgaccaacatcgcgttcaacgcggcgcgg
cgttggatgcgcgacatggccgacggcatcagccccagcgagtcggtcggcgccaaggtc
gccttcttcagcctggaaatgagcgcggaccagctggcgacgcgtatccttgccgagcaa
tcggggatcagctccgaaaacctgcgcatgggcaagatcagcaaggcggaattcggccag
ctcgccgccgccgccgccgagctggagaatctgccgttcttcatcgacgacaccggcggt
ctgtcgatcagcgcgctccacacgcgcgtgcgccggttgcagcggcggcacaacaaccag
atcggcctcgtcgtcgtcgactatctgcagctgctgaccagcggcaagggcggcaacgag
aatcgcgtgcaggaaatctccgagatcagccgcggcctgaagacgctggcgaaggacatg
aatgtgcccgtgctggcgctgtcgcagctgagccgtgcggtcgaaagccgcgaggacaag
cgtccgatgctgtcggacctgcgcgaatcgggctcgatcgagcaggacgcggacatggtc
tggttcgtgttccgcgaggattattataccgcgcagcgcgaacccaagcgcccgatggag
ggcgacgatgccaagatcttcgaagatcacgcgaaatgggctgccgacatggaaagagta
tacggcctggccgagctgatcgtcgccaagcaacgccatggtgcgacgggcaaggttgta
ttgaaatttgacccgacgatcacgcgcttcacggattatgcgggatattga
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