KEGG   Sphingomonas sp. FARSPH: DM480_13615
Entry
DM480_13615       CDS       T05685                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sphf  Sphingomonas sp. FARSPH
Pathway
sphf03030  DNA replication
sphf03430  Mismatch repair
sphf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sphf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DM480_13615
   03430 Mismatch repair
    DM480_13615
   03440 Homologous recombination
    DM480_13615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphf03032]
    DM480_13615
   03400 DNA repair and recombination proteins [BR:sphf03400]
    DM480_13615
Enzymes [BR:sphf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DM480_13615
DNA replication proteins [BR:sphf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DM480_13615
DNA repair and recombination proteins [BR:sphf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DM480_13615
SSDB
Motif
Pfam: DUF5710 HopA1
Other DBs
NCBI-ProteinID: AXJ96371
LinkDB
Position
2871126..2871674
AA seq 182 aa
MLIGQWIRDVEVEQVLDGVHAVVAHNVRFDRAFVTKRLPVFADLPWACSMREVDWAEHGL
GGGRSVAGLLTQAGFFLPDAHRAAADVWATTCLLAMTASDGRAIAAHLVETAQRPTQRLW
ANRAPFGCKDVLKAAGYSWSPERRAWWIEREAETVDHEAVWLKELSNAVQPDVERIDWYN
RH
NT seq 549 nt   +upstreamnt  +downstreamnt
atgctgatcgggcagtggatccgggacgtggaggtggagcaggtgctcgatggcgttcac
gctgtagttgcccacaacgtccggttcgacagggcgttcgtgacgaagcggctgccggtg
ttcgccgacctgccctgggcctgctccatgcgggaggtcgattgggcggagcatgggctc
ggcggggggcgcagcgtcgcggggctgctgacgcaggccgggttcttcctgcccgacgcg
catcgtgcagcggccgacgtctgggcgaccacctgcctgctggcgatgacggcgagcgat
ggtcgcgccatcgccgcgcatctagttgagaccgcgcagcgtccgacccaacgcctctgg
gccaaccgggcgccgttcggatgcaaggacgtgctcaaggccgcaggttatagctggtca
cctgaacgacgcgcatggtggatcgaacgtgaggccgagacggtagatcacgaggccgtg
tggctgaaagagctaagcaacgccgtccaacccgacgtagagcggatcgactggtacaat
cgccattaa

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