Sphingomonas sp. FARSPH: DM480_14355
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Entry
DM480_14355 CDS
T05685
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_14355
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_14355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Big_5
Motif
Other DBs
NCBI-ProteinID:
AXJ96494
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Position
3029626..3031836
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AA seq
736 aa
AA seq
DB search
MRFISVLALSTSVALALPAVAAAQAVPGEAQTSPDASAQTGANSNPDDIVVTARRREESL
KNVPIAVTAITGDRLKELQVNTVKDIANYTPGLSINSDSVGRAFVTIRGIGTTLIDTVQP
GVGIFIDGIYQPNTSYLNSPIVDIARIEVLRGPQGTLFGNNTLGGAINIVTRQPGNAWEG
RFDSAVAGPDNYASVSGSISGPLVKDVLAFRVGASYHVQNGFMRNTLDVGNQNPLEQKSV
NGTLRFTPARWATFTANGNYDRTFGGNTGYIHVAGPTDYTLTGATNQRSLATIDYYGANL
KSEFTSDRLKTKATVILAYNRKTSSAAGDGDFGPIDLLRTMGGSRLVTKTVEARFDTQWT
DAISTLIGVYGNRYVQTADNLSTLNFAALGLPLPAQRSPSSTYARNDTRALFGTIFVKLG
SKTDLAVGGRYDHQALEASQVSRTTIGGTPSFYTAPAYNKNAFQPRVTLTERWTPDFMTY
ASVAKGIRGGGQNGPGTRPQDATYRGDNVWTYELGTKFSGMNSRLTVNADIFYNDYNDFI
GQNSLAPSSTGAGFVAINLNTGHVESYGAEIEAHLRLTDQWRIDAGAAYLHSRITDDSQY
FATTGVHVSSDRVIFTPDYNFNASTTYTVPIGSSALVLDGGVVGKGSRIGSSLNPNVVPR
LSPYALVNGSIALRFSSGFEIAAFGTNLLNEKYIESYIDRSALDRALGPALGPIIGSNLA
IQGDRRRYGARASFRF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttatctccgtgctcgccctatctacgtcggtcgccctcgcgcttcccgctgta
gcggcagcgcaggccgtgccgggagaggcgcagaccagcccggacgccagcgcgcagacc
ggcgcgaattccaacccggacgatatcgtggtcaccgcgcgccggcgggaggaatcgctt
aagaacgttccgatcgcggtgaccgcgatcacgggcgaccggctgaaggagctgcaggtc
aacaccgtcaaggacatcgccaactatacgccgggcctcagcatcaactcggacagcgtc
ggccgggccttcgtgaccatccgtggcatcggcaccacgctgatcgataccgtccagccg
ggcgtgggcatcttcatcgacggcatctaccagcccaacaccagctatctgaactcgccg
atcgtcgacatcgcccggatcgaggtgctgcgcgggccgcagggtacgctgttcggcaac
aacacgctcggcggcgcgatcaacatcgtcacgcgccagccgggcaacgcatgggaaggc
cgcttcgattccgcggtcgccgggccggacaattatgcctccgtgtcgggcagcatcagc
ggcccgctggtcaaggacgtgctcgccttccgggtcggtgcctcctaccacgtccagaac
ggcttcatgcgcaacacgctggatgtgggcaatcagaacccgctggagcagaagagcgtc
aacggcacgctgcgcttcacgccggcgcgctgggcgacctttaccgccaacggcaattac
gaccgcaccttcggcggcaacaccggctacatccatgtcgcgggcccgacggattatacg
ctcaccggcgcgaccaatcagcgcagcctcgccaccatcgactattacggcgcaaacctg
aaaagcgaattcacgtccgaccggctgaagaccaaggcgacggtcatcctcgcctacaac
cgcaagacgtcgtcggctgcaggcgacggcgacttcgggccgattgacctgctgcgcacc
atgggcggatcacggctcgtcaccaagacggtggaggcgcggttcgacacgcaatggacg
gacgccatctcgaccctgatcggtgtctacgggaaccgctatgtccagacggccgacaac
ctcagcacgctgaacttcgccgccctcggcttgcccctccccgcccaacggtcgccaagc
agcacctacgccaggaacgacacccgcgcgctgttcgggacgatcttcgtaaagctcgga
tcgaagaccgatctcgccgtcggcggccggtacgatcaccaggcgctcgaggccagccag
gtcagccggaccaccatcggcggcacaccgtccttctacaccgcccccgcctacaacaag
aacgccttccagccgcgcgtcaccctaacggaacggtggacaccggacttcatgacctac
gcctcggtcgcgaagggcatccgcggcggcggccagaacggcccgggcacccggccccaa
gacgcgacctatcgcggcgacaatgtctggacctacgagctcggcacgaagttcagcggc
atgaacagccggctgaccgtcaacgccgacatcttctacaacgactataacgacttcatc
ggccagaactcgctggcgccgagctcgaccggcgcaggcttcgtcgccatcaacctcaac
accggccatgtcgaaagctacggtgccgagatcgaggcgcatctgcggctgaccgatcaa
tggcgcatcgacgccggcgccgcctatctccactcccgaatcaccgacgacagccagtat
ttcgccacgaccggcgtgcacgtctcctccgaccgcgtgatattcacccccgactataat
ttcaacgcgagcaccacctatacggtgccgatcggcagcagcgccttggtcttagacggc
ggggtggtcggcaaggggagccggatcggttcgtccctcaaccccaatgtcgtgccgcgg
ctgtccccctatgcgctggtcaacgggtcgatcgcgctgcgcttttcgagcgggttcgag
atcgccgccttcggcaccaacctgctgaacgagaaatacatcgaaagctatatcgaccgc
tccgcccttgatcgggcgctggggccggcccttgggccgatcatcggctcaaacctcgcg
atccagggcgaccgccgacgctacggcgcccgcgcgagcttcaggttctag
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