Sphingomonas sp. FARSPH: DM480_14825
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Entry
DM480_14825 CDS
T05685
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphf03019
]
DM480_14825
Messenger RNA biogenesis [BR:
sphf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DM480_14825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
Rad17
AAA_33
AAA_16
AAA_29
AAA_18
ABC_tran
ZSWIM1-3_C
AAA_28
AAA_30
T2SSE
CoaE
Zeta_toxin
PRK
RsgA_GTPase
dNK
Motif
Other DBs
NCBI-ProteinID:
AXJ96576
UniProt:
A0A345WSC4
LinkDB
All DBs
Position
3133681..3134595
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AA seq
304 aa
AA seq
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MSRRKDILLVTGMSGAGKSTVLKTLEDIGWEVVDNLPLVLLDRLLDAPLTEGIGDAHGPL
AIGIGTRTRDFDPARIVERIRRLRDEHGLDIGMLFLDCAGAELERRYSETRRRHPLAPDR
PASDGIGRERELLAPLRDWANRLIDTTRLSAHALAQQIRETFSRAGADEPVLSIVSFGFA
RGLPRNADLVFDMRFLRNPHWVPALRPGTGLDADVAAYVADDPAYPEAIDRIEGLLALLL
PRYRAEGKAYVTVAIGCTGGRHRSVHVAETLGSRLRADGFSPTITHRDLQAAPQDSLEGP
PAKA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgcaaggacatattgctcgtcaccggcatgtcgggcgcgggcaagtcgacc
gtgctcaagacgctcgaggacatcggctgggaagtcgtcgacaatctgccgctcgtgctg
ctcgaccggctgctcgatgcgccgctgaccgaggggatcggcgatgcgcacgggccgctg
gcgatcggcatcggtacgcggacgcgcgatttcgatccggcgcggatcgtcgagcgtatc
cggcggctgcgcgacgaacacggtctcgacatcggcatgctgttcctcgactgcgccggc
gcggagctggagcgacgctattccgagacgcggcggcgccatccgctcgcgccggaccgc
ccggcgagcgacggcatcgggcgcgagcgcgaattgctcgcccccttgcgcgactgggcg
aaccgactgatcgacacgacccgcctgtccgcgcatgcgctcgcgcagcagatccgcgaa
accttctcgcgcgccggtgcggacgagccggtgctgtcgatcgtctcgttcgggttcgcg
cgcggcctgccgcgcaatgcggacctggtgttcgacatgcgcttcctgcgcaatccgcac
tgggtgcccgcgctgcggcccggaactgggctcgatgcggatgtcgccgcttatgtcgcg
gacgatcccgcctatccggaggcgatcgaccggatcgaggggctgctcgcgctgctgctg
ccgcgataccgcgccgagggcaaagcctatgtcacggtcgcgatcgggtgcaccggcggg
cgccaccgatccgtccatgtcgccgagacgctcggcagccggttgcgcgcggatggtttt
tcgcccaccatcacgcatcgcgacctgcaggccgcgccgcaggactcgctcgaagggcca
ccggccaaagcatga
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