Sphingomonas sp. FARSPH: DM480_14875
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Entry
DM480_14875 CDS
T05685
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphf03009
]
DM480_14875
Enzymes [BR:
sphf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DM480_14875
Ribosome biogenesis [BR:
sphf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DM480_14875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
Motif
Other DBs
NCBI-ProteinID:
AXJ97143
UniProt:
A0A345WTZ1
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All DBs
Position
complement(3140917..3142062)
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AA seq
381 aa
AA seq
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MTADGRHAAFAAPGDLLADDGRVIPGPHHQAPPCRHFPACGGCQLQHLDDDSYAAFCTDR
VASALDAQGLSAPLRPPLVSPPRTRRRANLHAEGKGGRVTIGFTGEKSHAIVDLAECHVL
VPELFALVAPLRRLLQRLGLRRRADIHLTLADQGPDILVSGIKAEGLAAAEAITQFCEGH
GVARFALNDGLGPETRWEPQGVTITLGGVPVPLPPASFLQATREGEAALVAAMREAVAGA
GTIADLFSGLGTFALAMPGRVYAAEGARDAIMALKAGAALAQKPVFAEHRDLYRRPLTVA
ELDRFDAVILDPPRSGAREQVDALAACQTKVIGYVSCNPSSFARDAKILCEAGWRLDWVQ
PVGQFRWSTHVELAARFVPQG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgacggacgccacgccgccttcgccgcgccgggcgacctgctggccgacgat
gggcgggtcatccccggcccgcaccatcaggccccgccatgccgccatttcccggcgtgc
ggcgggtgccagctgcagcatctcgacgacgacagctacgccgccttctgcaccgatcgc
gtcgcgtcggcgctcgatgcccaggggctgtccgcgccgctgcggccgccactcgtatcg
ccaccacggacccggcgtcgcgcgaaccttcacgcggagggcaagggcggacgcgtgacg
atcggcttcaccggcgaaaagagccatgcgatcgtcgatcttgccgaatgccacgtgctg
gtgccggagctgttcgcgctggtcgcgccgctgcgtcgcctgctccagcggctcgggctg
cgccggcgcgcggatattcatctgacgctcgccgatcagggtcccgacatcctcgtctcc
ggcatcaaggccgaagggctggcggcggcggaggcgatcacgcaattctgcgaggggcat
ggcgtcgcccgcttcgcgctgaacgatggccttggtccggaaacgcgctgggagccgcag
ggcgttacgatcacgctgggcggcgtccccgtgccgttgccgcccgcttcctttctgcag
gcgacgcgggagggcgaggcggcgttggtcgcggcgatgcgcgaggcggtggcgggcgcg
ggcacgatcgccgacctgttcagcggccttggcaccttcgcgctggcgatgccgggccgg
gtctatgccgccgagggcgcgcgcgacgcgatcatggcgttgaaggcgggtgcggcgctg
gcgcagaaacccgtattcgccgaacatcgcgatctgtaccggcgcccgctgaccgtcgcc
gagctcgaccggttcgatgccgtcatcctcgatccgccccgcagcggcgcgcgcgaacag
gttgacgcgctcgccgcatgccagaccaaggttatcggctacgtttcttgcaatcccagc
agcttcgcgcgtgatgcgaagatcttgtgcgaagccggctggcggctggattgggtgcaa
cccgtcggccagttccgctggtcgacccatgtcgagcttgccgcccgcttcgtacctcag
ggatag
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