Sphingomonas sp. FARSPH: DM480_15235
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Entry
DM480_15235 CDS
T05685
Name
(GenBank) DNA mismatch repair endonuclease MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DM480_15235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphf03400
]
DM480_15235
DNA repair and recombination proteins [BR:
sphf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
DM480_15235
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AXJ96638
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Position
complement(3219219..3221012)
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AA seq
597 aa
AA seq
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MSIRRLPEQLVNRIAAGEVVERPASALKELVENAIDAGATRIAVVLSDGGLARIEVADDG
CGMTPADMALALERHATSKLPDEAIENVTTMGFRGEALPSIASVAQLTLESRVRGAEGWA
RTVDNGVVMREAPAALPPGTRVVVEALFARVPARRKFLRSPRAEYAACLDTIRRLAMARP
DIAFSLEHDGRRVLSVMAGEDRPARVAALTDRALADNAVAIDLEREGHVLGGVASIPTYN
RGVADHQYLFVNGRPVRDRLLMGAIRGAYAEMLPRDRHAVVALFLDVPPDQVDVNVHPAK
TEVRFRDPALVRGLIVSGLRRALDEAGHRSVQRPAEAALAMWQAEPVSAMAGAAPPVFPG
TSETRADESALFRQFSLNDRRATFQPPPPAARAEAAWAPPPQTASHPLGVARGQVARTYI
VAEAEDGLVLVDQHAAHERLVLERMRAALTGGRVASQALLIPEVVELDEPGCDRLEARGG
ELAELGLDLERFGPTAMLVRATPALLGQADPKGLVIDLADELAAFDQALSLRERLDAVAG
TMACHGSVRAGRVLSVAEMNALLREMEATPHSGQCNHGRPTWVKLAHGDIEKLFGRK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatacgtcgtctgcccgaacaactcgtcaatcgtatcgccgccggtgaagtggtg
gaaaggcccgccagcgcgttgaaggagctggtcgagaatgcgatcgacgcgggcgcgact
cggatcgcggtcgtgctgtcggacggcgggctcgcgcggatcgaggtcgccgacgatggc
tgcggcatgacgcccgccgacatggcgctggcgctcgaacggcacgcgacgtccaagctg
cccgatgaagccattgaaaacgtgacgacgatgggctttcgcggcgaagccctgccctcg
atcgccagcgtcgcgcagctgacgctggaaagccgcgttcggggggcggagggctgggcg
cggacggtcgacaacggcgtcgtgatgcgcgaggcgccggccgcgctgccgccgggcacg
cgcgtcgtcgttgaggctttgttcgcccgcgtgcccgcgcgacgcaagttcctgcgctcg
ccacgcgccgaatatgccgcctgtctcgatacgatacgccggttggcgatggcacggccc
gatatcgccttttcgctcgagcatgacggccggcgggtcttgtcggtgatggcgggcgag
gaccggccggcgcgagtcgcggcgttgaccgaccgcgcgctcgccgacaatgcggtcgcg
atcgacctggagcgcgaaggccatgtgctgggcggggtggcgagcatccccacctacaat
cgcggggtcgccgatcaccaatatctgttcgtcaacggccgcccggtgcgcgaccgcctg
ctgatgggggcgatccgcggggcctatgcggaaatgctgccgcgcgaccggcatgcggtc
gtcgcgctgttcctcgacgtgccgcccgaccaggttgacgtcaacgtccatcccgccaag
accgaggtgcgcttccgcgaccccgccctggtccgcggcctgatcgtgtcgggcctgcgc
cgcgcgctggacgaggcggggcatcgcagcgtgcagcgccccgcagaggcggcattggcg
atgtggcaggcggagccggtgtccgcgatggcgggcgcggcgccgccggtctttccgggc
acgtcggagacgcgggcggacgagagcgccttgttccgacagttcagcctcaacgaccgg
cgtgcgaccttccagccgccgccacccgccgcccgcgccgaggccgcctgggcgccgccg
ccgcagaccgcttcgcacccgctcggcgtcgcgcgcgggcaggtcgccaggacgtatatc
gtcgcggaggcggaggatggcctcgtcctcgtcgaccagcatgcggcgcacgagcggctg
gtgcttgagcgcatgcgcgccgcgctgaccggcgggcgggtggcgagccaggcgttgctg
atccccgaggtggtggaactggacgaaccgggctgcgaccggctggaggcgcgcgggggc
gaactcgccgagctcggactcgatctcgaacgcttcggcccgaccgcgatgctggtgcgc
gcgaccccggccctgctggggcaggcggatccgaaggggctggtgatcgatcttgcggac
gagctcgccgccttcgaccaggcgctgtcgctgcgcgagcggctggatgcggtggcgggg
acgatggcatgccatggatcggtgcgcgctggccgcgttctgtcggtcgcggaaatgaac
gcgctgctccgcgagatggaggcgacgccgcattccggccagtgcaaccacggacggccc
acctgggtgaagctggcacatggcgacatcgagaagttgttcgggcgcaaatag
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