Sphingomonas sp. FARSPH: DM480_15360
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Entry
DM480_15360 CDS
T05685
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sphf
Sphingomonas sp. FARSPH
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphf03009
]
DM480_15360
Enzymes [BR:
sphf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DM480_15360
Ribosome biogenesis [BR:
sphf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DM480_15360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AXJ96658
UniProt:
A0A345WSK6
LinkDB
All DBs
Position
3241014..3242384
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AA seq
456 aa
AA seq
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MAPNSVKDAAAKGDRIAKLLARAGIASRREVERMIAEGRVALDGAVVDTPATILSSLRGV
TVDGNPVAAPEPTRLFLFHKPTGLLVTERDPKGRATIYDRLPRDLPRLVPVGRLDLNTEG
LLLLTTDGGFKRQLELPSTGVERTYRVRAYGNVTQAQLEDLADGIEIEGIRYGSIDANIE
RRTGANVWIEMTLTEGKNREVRRVLEHLGLQVGRLIRTRYGPFLLGDLPTGEIGEVKQHE
LVAFRRTLKGGAPEEIATDAPRPGFRTAPTVDRTARARSRTGSAEPQRPARAARVERTGG
DHPRVVRPLRPGDSPDRTPRGLRAGEAPRPARTPRTDRADGDRSRAVRPQRANGAGERTQ
RNTDAPRGDRAERTSADSGRTAPRGQRRDGDAARPPRNAHPSDAARPERSPRPASDSSRS
PRSGGGARAPRPGSGGGSGPGRPGRGGGRPPRGGRA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaattccgtaaaagacgccgccgccaagggcgatcgtatcgccaagctcctc
gcccgcgcaggcatcgcatcacggcgcgaagtcgaacgcatgatcgcggaagggcgcgtt
gcgctggatggcgcagtggtggacacgccggcgacgatcctgtcgtcgctgcgcggcgtg
acggtcgacggcaatcccgtcgccgcgccggagccgacgcgcctgtttttgtttcacaag
ccgaccggcctgctcgtcaccgaacgcgatccgaagggacgcgcgacgatctacgaccgc
ctgccgcgcgacctgccacggctggtgcctgtcggccggctcgacctcaacaccgaaggc
ctgctgctgctgaccacggacggcggcttcaagcggcagctggagctgccctcgaccggg
gtcgagcgcacctatcgcgtccgcgcctatggcaacgtcacacaggcgcagctggaggat
ctggcggacgggatcgagatcgaggggatccgctacggctcgatcgacgccaacatcgaa
cgtcgcaccggcgcgaacgtgtggatcgagatgacgctgaccgagggcaagaaccgcgag
gtgcgccgggtgctcgaacatctggggctgcaggtcggccgcctgatccgcacgcgctac
gggccgttcctgctcggcgacctgccgaccggcgagatcggcgaagtgaagcagcatgag
ctcgtcgccttccgccgcacgctgaagggcggcgcgcccgaagaaatcgccacggacgcc
ccgcgccccggcttccgcaccgcgcccaccgtcgatcgcacggcccgcgcccgcagtcgc
accggcagcgccgagccgcagcgcccggcgcgcgccgccagggtcgagcggacgggcggc
gaccatccccgggtcgttcgcccgctacgccccggcgacagcccggaccgaacgccgcgc
ggccttcgcgcgggcgaggcgccacgccccgcgcgcacgccgcgcaccgatcgcgcggat
ggcgatcgttcgcgcgccgtccgcccccagcgcgcgaacggcgccggcgagcgcacgcaa
cgaaacacggatgcgccgcgcggcgatcgcgcggagcggacatccgccgattcgggccgt
accgccccgcgcggccaacggcgcgatggcgatgcggcacgtccgccccgcaacgcgcac
ccgtccgacgctgcacgcccggagcgctcgccccgcccggcatccgacagcagccgcagc
ccacgatctggcggcggcgcgcgtgctccgcgcccgggcagcggcggcggcagcgggccc
ggccgtcccggccgcggcggcggtcgtccgccgcgcggaggccgcgcatga
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