Sphingomonas sp. FARSPH: DM480_15450
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Entry
DM480_15450 CDS
T05685
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf00061
Fatty acid biosynthesis
sphf00071
Fatty acid degradation
sphf01100
Metabolic pathways
sphf01212
Fatty acid metabolism
sphf02024
Quorum sensing
sphf04146
Peroxisome
Module
sphf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DM480_15450
00071 Fatty acid degradation
DM480_15450
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DM480_15450
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM480_15450
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphf01004
]
DM480_15450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphf04147
]
DM480_15450
Enzymes [BR:
sphf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DM480_15450
Lipid biosynthesis proteins [BR:
sphf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DM480_15450
Exosome [BR:
sphf04147
]
Exosomal proteins
Exosomal proteins of breast milk
DM480_15450
Exosomal proteins of breast cancer cells
DM480_15450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AXJ97165
LinkDB
All DBs
Position
complement(3262213..3263904)
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AA seq
563 aa
AA seq
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MTGMPSDAGERTADQPLAIKRGVPLAERPRLLGAMLDASARRFPDRVAVDFLGGTTSWGA
LAKAVDRAAAGLQALGVVKGTRVALCLPNTPYYPVLFYATLKAGGIVVNVNPLYVERELA
HLIHDSGAEIIVTCDLAEIQARVLKVSRETGIRHVVSCPIADALPTIKKFAYKIVKRKEI
GRAPRDAMHLYYADLMAKGAAPAPVAVDPHEVAVLQYTGGTTGLPKAAMLSHANIVANTD
AMLVHVGGETPDQDRVMGVLPLFHVFALTNVLTFSTLVGAEMILLPRFEMKQLLGAVKRT
RPTYFPAVPTIYNALANLPDADVPDLSSIKVCISGGAPLPIEVRHLFEQRTGAKLVEGYG
LSEASPIITCNPFEGVNKEGSAGLPFPGTTIEIRDREDPSRIMPKGEKGEICARGPQVMS
GYWHKPHETEGAFADGALRTGDVGYLDDDGYLFIVDRIKDMILCGGYNVYPRVIEEALYE
HPAVAEAVVIGVPDQYRGQSPKAFVTLSEPGAVTGDELRDFLRDKVSKIELPRAVEIRDT
LPKTLIGKLSKKELVEEERRKAV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggatgccgagcgacgccggagagcggactgcggaccagccgctggcgatcaag
cggggcgtgccgctggccgaacgaccgcgtctgctgggtgcgatgcttgacgcgtcggca
cggcgttttccggatcgcgtcgcggtcgatttcctgggcggcacgacgagctggggcgcg
ttggccaaggcggtggaccgcgccgcggccgggctgcaggcgctgggcgtcgtcaagggt
acgcgcgtcgctctgtgcctgcccaacacgccctattatccggtgttgttctacgcgacg
ctcaaggccgggggcatcgtcgtcaacgtcaacccgctgtacgtcgagcgcgagctcgcg
catctgatccatgattcgggcgcagagatcatcgtcacctgcgacctcgccgaaatccag
gcgcgggtgctgaaggtgtcgcgcgagaccgggatccgccacgtcgtcagctgcccgatc
gccgatgcgctgccgacgatcaaaaagttcgcgtacaagatcgtcaagcgcaaggagatc
ggccgcgcgccgcgtgacgcgatgcacctttattacgccgatctgatggcgaagggcgcg
gcgccagcgccggttgcggtcgacccgcacgaggtcgccgtactgcaatataccggcggc
accaccggcctgcccaaggcagcgatgctcagccacgccaacatcgtcgccaataccgac
gcgatgctcgtccacgtcggcggggaaaccccggaccaggaccgggtgatgggcgtgctg
ccgctgttccacgtctttgcgttgaccaacgtgctgaccttctcgacattggtgggcgcg
gaaatgatcctgttgccgcggttcgagatgaagcagctgctcggtgcggtgaagcggacg
cggccgacctatttccccgccgtgccgacgatctacaacgcgctcgccaatctgcccgat
gccgatgtccccgacctgtcgtcgatcaaggtttgcatttcgggcggggcgccattgccg
atcgaggtgcgtcatctgttcgaacagcgcaccggcgcgaaactggtcgagggatacggt
ctgtccgaagcctcgccgatcatcacctgcaatccgttcgagggcgtcaacaaggaaggt
tcggcaggtctgccgttccccggcacgacgatcgaaattcgcgaccgcgaagacccgtcg
cgcatcatgcccaagggcgaaaagggggagatctgcgcgcgcggcccgcaggtgatgagc
ggttactggcacaagccgcacgagacggaaggggccttcgccgacggcgcgctgcgcacc
ggtgacgtcggctaccttgacgacgacggctatctgttcatcgtcgaccggatcaaggac
atgatcctgtgcgggggctacaacgtctatccacgggttatcgaggaagcgttgtacgag
catcccgcggtcgcggaagccgtggtgatcggtgtgcccgaccagtatcgcgggcaaagt
ccgaaggccttcgtcacactgtccgagcccggcgcggtgaccggcgacgaactgcgcgac
ttcctacgcgacaaggtgagcaagatcgagcttccccgcgcggtcgagatacgcgacact
ctgcccaagacgctgatcggcaagctttccaagaaagagctggtcgaagaagaacggcgc
aaggcagtgtga
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