KEGG   Sphingomonas sp. FARSPH: DM480_17640
Entry
DM480_17640       CDS       T05685                                 
Name
(GenBank) transporter
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
sphf  Sphingomonas sp. FARSPH
Pathway
sphf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sphf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM480_17640
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphf02044]
    DM480_17640
Enzymes [BR:sphf01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     DM480_17640
Secretion system [BR:sphf02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   DM480_17640
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_22 TrwB_AAD_bind AAA_16 FtsK_SpoIIIE AAA_7 ATPase T2SSE
Other DBs
NCBI-ProteinID: AXJ97503
UniProt: A0A345WV01
LinkDB
Position
p03:20702..23056
AA seq 784 aa
MKVALKEVMPTKFLPYARHINDEMIVLDSGDLMLTFELQGRAFETSDVRDLNDWHSKLNV
MLRNLHDDRLSIWTHLVRSRVEQYPGGNFRSKFARDLDAAYFERMNKERMFMNRFFVTLV
ARPAVHGADKLIQLFKSKSRLGAEADQIDEDLVERLEDKARDFEKLLARCDPRRLSIYGH
RGLKFSEPLEVAEMIMTGRHRRVPIIRGHLGSALYRQRTIFGGETVEVRDADRSSFGGIF
GIREYPALTTPRQFESLLAVDFGFVLTQSFTFLGRATAAERFRLRQKQMENADDRAKSQM
FDLIDAADDLMSNRFVLGDHHFTLAVYADSLRALRDNMSIARTALADTGMVAAREGAALE
AAYWSQLVGNFAWRARPAPITSLNFAAFSPFHTYPAGMPTGNHWGDAIALLKTSARSPYF
FSFHKRDIGHTMVIGPTGGGKTVLVNFLMAQAEKTGARQIFIDKDRGAQIFVLASGGTYL
TLQNGVPTGFAPLKALSNTAEDRAWLSLFVRNLVRAENRPITVQEERLIDDGIASVMRLP
PEKRSFDALRSVLGMADAAGVGARLEKWTSRGALGWVFDNAEDEMKLDTRFLGFDMTEFL
DNPDIRTPLMLYLFRRIDDLLTGERTIIAVDEFWKALGDDAFRSFAQDGLKTYRKRNALM
VFATQSPADALKSDISHSILEQVATQIMLPNPKGARRDYIDGFGMSEAEFALIREELSPE
SHKFLVKQGHDSVVVELDLTGLDDELAVLSGRAETTAIACEVVAEYGRDPAVWLPIFQKR
RRPS
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgaaagtcgcgctcaaggaagtgatgccgacgaaattcctgccgtatgcgcggcacatc
aatgacgaaatgatcgtgctggactccggcgacctgatgctcactttcgagctgcaaggg
cgcgcgttcgagacctccgacgttcgcgatttgaacgattggcactccaagctgaacgtc
atgctgcgcaacctgcatgacgatcggctgtcgatctggacgcatctggtccgctcccgc
gtcgaacaatatccgggcggcaacttccgctcgaagttcgctcgggatctcgatgcggcc
tatttcgagcggatgaacaaagagcggatgttcatgaaccgcttctttgtgacgctcgta
gcgcgccctgcggtgcacggggccgacaagctcattcaactcttcaagagcaagtcgcgg
ctcggggccgaagccgatcaaatcgacgaggacctggttgagcgcctagaggacaaggcg
cgcgattttgagaagctgctagctcggtgcgacccgcgccggctttcgatctacgggcat
cgcggcctcaagttctcggagccgctggaagtcgcggaaatgataatgacgggccgccat
cggcgcgttccgatcattcgcggccacctcggaagcgcgctctaccggcaacggacgatc
ttcggcggtgagacggtcgaggtccgcgacgcggatcgcagctcgtttggcggcatcttc
ggcatacgcgagtatccggcgctgacgacaccgcgccagttcgaatccctgctcgcggtc
gatttcggcttcgtgctgacgcaatcgttcacgttccttggccgcgcgacggctgctgag
cgcttccggctgcggcaaaagcagatggagaacgccgacgatcgcgcgaaaagccagatg
ttcgatctgatcgacgcggccgacgatctgatgtcgaaccgcttcgtcctgggcgatcat
cacttcacgctcgcggtgtatgccgacagcctccgcgcgttgcgcgataatatgtccatc
gcccgaacggcgctcgccgatacgggcatggtcgcggcgcgcgagggcgcggcgcttgag
gcggcctattggagccagctcgtcggcaatttcgcgtggcgggcaaggccggcgccgatc
acgtcgctgaacttcgcggcgttctcgcccttccacacctaccctgcggggatgccgacg
gggaaccattggggcgacgcaatcgcgctgctcaagacgagcgcgcggagcccctacttc
ttcagcttccacaagcgcgacatcggacacacgatggtcatcggccccacgggcggcggt
aagacggttctcgtcaacttcctgatggcgcaagcggagaagacgggcgcgcggcaaatc
ttcatcgacaaggaccgcggcgcgcaaatcttcgttctggcgtcgggcggcacatacctg
accctgcagaacggcgtccccacggggtttgcgccgctcaaggcgttgtcgaacaccgct
gaggaccgggcctggctgtcgctattcgtgcgcaacctagtgcgcgccgaaaaccgcccg
atcacggttcaggaagagaggctgattgacgacggcattgcctcggtgatgcggcttcct
ccggaaaaacggtcgttcgacgcgctgcggagcgtcctcggtatggcggacgctgccggc
gtcggcgcgcgtctcgaaaagtggacttcgcgcggtgccctgggctgggtgttcgacaat
gcggaagacgaaatgaagctcgatacgcgcttcctcggcttcgacatgacggagtttctg
gacaatcccgatattcgcacgccgctgatgctctacctcttccggcgtatcgacgatctg
ctgacgggcgagcggacgattatcgccgtcgacgagttctggaaggcgctgggcgatgat
gcttttcgcagcttcgctcaggacggcctcaaaacataccggaagcgcaacgcgctgatg
gtcttcgcgacgcaatcgccggctgatgctctcaagagcgacatcagccattcgatcctt
gagcaagtcgctacccaaatcatgctgccaaacccgaagggtgcgcggcgtgattacatc
gacggtttcggcatgtccgaagccgaatttgccctgatccgtgaggaattgtcgccggag
tcgcacaagttcctcgtcaagcaagggcatgacagtgttgtcgtcgagctggatcttaca
gggctggacgacgaacttgcggtgctttcgggacgtgccgagacaaccgcaatcgcgtgc
gaggtagttgccgaatacggccgcgaccccgctgtctggctgccgatctttcaaaagcgg
cgtcgtccaagctga

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